Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CQE8 | RTRAF | RNA transcription, translation and transport … | Mus musculus (Mouse) | 244 aa |
Protein Details: Q9CQE8 (RTRAF)
Protein Information
| Accession | Q9CQE8 |
|---|---|
| Protein Names | RNA transcription, translation and transport factor protein |
| Gene Symbol | RTRAF |
| Organism | Mus musculus (Mouse) |
| Length | 244 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31772009 34884899 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.684
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
13
Liver tissue
Specificity: 0.684
13/19 (68.4%)
3
Neural Stem Cells
Specificity: 0.158
3/3 (100.0%)
3
Liver membrane
Specificity: 0.158
3/6 (50.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MFRRKLTALD11YHNPSGFNCK21DETEFRNFIV31WLEDQKIRHY41KIEDRGNLRN
51-10051IHSSDWPKFF61EKYLKDVNCP71FKIQDRQEAI81DWLLGLAVRL91EYGDNAEKYK
101-150101DLVPDNRKNT111DNAAKNAEPL121INLDVNNPDF131KAGVMALANL141LQIQRHDDYL
151-200151VMLKAIRILV161QERLTQDAVA171KANQTKEGLP181VALEKHILGF191DTGDAVLNEA
201-244201AQILRLLHIE211ELRELQTKIN221EAIVAVQAII231ADPKTDHRLG241KVGR
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 19 | Experimental CYSMODDB SWISSPALM DBPTM | RNA transcription translation and transport factor protein | 28526873 |