Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CQJ8 | Ndufb9 | NADH dehydrogenase [ubiquinone] 1 beta … | Mus musculus (Mouse) | 179 aa |
Protein Details: Q9CQJ8 (Ndufb9)
Protein Information
| Accession | Q9CQJ8 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 (Complex I-B22) (CI-B22) (NADH-ubiquinone oxidoreductase B22 subunit) |
| Gene Symbol | Ndufb9 |
| Organism | Mus musculus (Mouse) |
| Length | 179 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAFCAPPAYL11THQQKVLRLY21KRALRHLESW31CIHRDKYRYF41ACLMRARFEE
51-10051HKNEKDMMRA61TQLLREAEEE71FWQNQHPQPY81IFPDSPGGTS91FERYECYKVP
101-150101EWCLDYWHPS111EKAMYPDYFS121KREQWKKLRM131ESWDREVKQL141QEETSPDGIM
151-179151TEALPPARRE161GDLPPLWWHI171VTRPRERPT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.95
Deep-Palm: 0.02
|
|
| 31 | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 Complex 1 protein (LYR family) NDUFB9, LYR domain Complex 1 LYR protein domain |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.95
|
|
| 42 | SWISSPALM DBPTM CYSMODDB | NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 Complex 1 protein (LYR family) NDUFB9, LYR domain Complex 1 LYR protein domain |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.31
|
| 96 | - | - | - |
Deep-Palm: 0.09
|
|
| 103 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.455
5
Brain
Specificity: 0.128
5/5 (100.0%)
4
Liver
Specificity: 0.103
4/4 (100.0%)
2
Testis
Specificity: 0.051
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
28
Brain tissue (Mass)
Specificity: 0.718
28/56 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.