Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CR00 | Psmd9 | 26S proteasome non-ATPase regulatory subunit … | Mus musculus (Mouse) | 222 aa |
Protein Details: Q9CR00 (Psmd9)
Protein Information
| Accession | Q9CR00 |
|---|---|
| Protein Names | 26S proteasome non-ATPase regulatory subunit 9 (26S proteasome regulatory subunit p27) |
| Gene Symbol | Psmd9 |
| Organism | Mus musculus (Mouse) |
| Length | 222 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSGEDVPHRA11ESSEARAAAV21SDIQDLMRRK31EEIEAEIKAN41YDVLESQKGI
51-10051GMNEPLVDCE61GYPRADVDLY71QVRTARHNII81CLQNDHKALM91KQVEEALHQL
101-150101HARDKEKQAR111DMAEAREEAM121NRRLASNSPV131LPQAFARVNS141ISPGSPASIA
151-200151GLQVDDEIVE161FGSVNTQNFQ171SVQNVGTVVQ181HSEGKPLNVT191VIRRGEKHQL
201-222201RLIPTRWAGK211GLLGCNIIPL221QR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 59 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 81 | Nas2 N terminal domain |
Brain
(34200797)
| - |
Deep-Palm: 0.75
|
|
| 215 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.19
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
Brain
Specificity: 0.111
2/2 (100.0%)
1
Liver
Specificity: 0.056
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.833
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.