Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CR21 | Ndufab1 | Acyl carrier protein, mitochondrial (ACP) … | Mus musculus (Mouse) | 156 aa |
Protein Details: Q9CR21 (Ndufab1)
Protein Information
| Accession | Q9CR21 |
|---|---|
| Protein Names | Acyl carrier protein, mitochondrial (ACP) (CI-SDAP) (NADH-ubiquinone oxidoreductase 9.6 kDa subunit) |
| Gene Symbol | Ndufab1 |
| Organism | Mus musculus (Mouse) |
| Length | 156 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 34200797 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASRVLCACV11RRLPAAFAPL21PRLPTLALAR31PLSTTLCPEG41IRRRPGALQS
51-10051ALALAQVPGT61VTHLCRQYSD71APPLTLDGIK81DRVLYVLKLY91DKIDPEKLSV
101-150101NSHFMKDLGL111DSLDQVEIIM121AMEDEFGFEI131PDIDAEKLMC141PQEIVDYIAD
151-156151KKDVYE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.07
|
|
| 9 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.17
|
|
| 37 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 65 | - | - | - |
Deep-Palm: 0.96
|
|
| 140 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Liver
(37925639)
Brain
(35358180)
|
Deep-Palm: 0.40
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.240
6/6 (100.0%)
3
Brain
Specificity: 0.120
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
12
Brain tissue (Mass)
Specificity: 0.480
12/56 (21.4%)
4
Liver tissue (Mass)
Specificity: 0.160
4/8 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.