Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CRC0 | Vkorc1 | Vitamin K epoxide reductase complex … | Mus musculus (Mouse) | 161 aa |
Protein Details: Q9CRC0 (Vkorc1)
Protein Information
| Accession | Q9CRC0 |
|---|---|
| Protein Names | Vitamin K epoxide reductase complex subunit 1 (EC 1.17.4.4) (Vitamin K1 2,3-epoxide reductase subunit 1) |
| Gene Symbol | Vkorc1 |
| Organism | Mus musculus (Mouse) |
| Length | 161 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGTTWRSPGL11VRLALCLAGL21ALSLYALHVK31AARARDENYR41ALCDVGTAIS
51-10051CSRVFSSRWG61RGFGLVEHML71GADSVLNQSN81SIFGCLFYTL91QLLLGCLRGR
101-150101WASILLVLSS111LVSVAGSVYL121AWILFFVLYD131FCIVCITTYA141INVGLMLLSF
151-161151QKVPEHKTKK161H
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | - | - | - |
Deep-Palm: 0.98
|
|
| 43 | SWISSPALM DBPTM CYSMODDB | Vitamin K epoxide reductase family Vitamin K epoxide reductase Vitamin K epoxide reductase complex subunit 1 VKOR domain superfamily |
Liver
(28526873)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.91
|
| 51 | SWISSPALM DBPTM CYSMODDB | Vitamin K epoxide reductase family Vitamin K epoxide reductase complex subunit 1 |
Liver
(28526873)
Forebrain
(28680068)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
| 85 | - | - | - |
Deep-Palm: 0.95
|
|
| 96 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.97
|
|
| 132 | - | - | - |
Deep-Palm: 0.03
|
|
| 135 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.174
4/4 (100.0%)
2
Testis
Specificity: 0.087
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
17
Brain tissue (Mass)
Specificity: 0.739
17/56 (30.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.