Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CXF4 | Tbc1d15 | TBC1 domain family member 15 … | Mus musculus (Mouse) | 671 aa |
Protein Details: Q9CXF4 (Tbc1d15)
Protein Information
| Accession | Q9CXF4 |
|---|---|
| Protein Names | TBC1 domain family member 15 (GTPase-activating protein RAB7) (GAP for RAB7) (Rab7-GAP) |
| Gene Symbol | Tbc1d15 |
| Organism | Mus musculus (Mouse) |
| Length | 671 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAGVVSGK11IIYEQEGVYI21HSSCGKANDQ31DSLISGILRV41LEKDAEVIVD
51-10051WRPLDDALDS61SSILCAGKDS71SSVVEWTQAP81KERAHRGSDQ91QSSYEAEWDM
101-150101VTTVSFKKKP111HTNGDAPGHR121NGKSKWSFLF131SLADLKSVKQ141SKEGMGWSYL
151-200151VFCLKDDVML161PALHFHQGDS171KLLIESLEKY181VVLCESPQDS191RTLLVNCQNK
201-250201SLSQSFENLL211DEPAYGLIQK221IKKDPYTATM231VGFSKVTNYI241FDSLRGSDPS
251-300251THQRPPSEMA261DFLSDAIPGL271KINQQEEPGF281EVITRIDLGE291RPVVQRREPV
301-350301SLEEWNKSLD311PEGRLVAVES321MKQKIFRGGL331SHSLRKQAWK341FLLGYFPWDS
351-400351TKEERTQLQK361QKTDEYFRMK371LQWKSVSEAQ381EKRNSRLRDY391RSLIEKDVNR
401-450401TDRTNKFYEG411QDNPGLILLH421DILMTYCMYD431FDLGYVQGMS441DLLSPLLYVM
451-500451ENEVDAFWCF461ASYMDQMHQN471FEEQMQGMKT481QLIQLSTLLR491LLDSGFCSYL
501-550501ESQDSGYLYF511CFRWLLIRFK521REFSFLDILR531LWEVMWTELP541CKNFHLLLCC
551-600551AILESEKQQI561MAKHYGFNEI571LKHINELSMK581IDVEDILCKA591EAISLQMAQC
601-650601KELPQAVCEI611LGLQDSEITT621PDSDTDENVG631SPCPVSAFPS641STLPILAASE
651-671651AKDDSPTQTL661ASPNACRLTP671A
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 24 | - | - | - |
Deep-Palm: 0.55
|
|
| 65 | - | - | - |
Deep-Palm: 0.88
|
|
| 153 | - | - | - |
Deep-Palm: 0.67
|
|
| 184 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.94
|
| 197 | - | - | - |
Deep-Palm: 0.90
|
|
| 427 | - | - | - |
Deep-Palm: 0.05
|
|
| 459 | - | - | - |
Deep-Palm: 0.03
|
|
| 497 | - | - | - |
Deep-Palm: 0.97
|
|
| 511 | - | - | - |
Deep-Palm: 0.58
|
|
| 541 | - | - | - |
Deep-Palm: 0.60
|
|
| 549 | - | - | - |
Deep-Palm: 0.36
|
|
| 550 | - | - | - |
Deep-Palm: 0.27
|
|
| 588 | - | - | - |
Deep-Palm: 0.74
|
|
| 600 | - | - | - |
Deep-Palm: 0.96
|
|
| 608 | - | - | - |
Deep-Palm: 0.93
|
|
| 633 | - | - | - |
Deep-Palm: 0.86
|
|
| 666 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.07
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.