Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CXT8 | Pmpcb | Mitochondrial-processing peptidase subunit beta (EC … | Mus musculus (Mouse) | 489 aa |
Protein Details: Q9CXT8 (Pmpcb)
Protein Information
| Accession | Q9CXT8 |
|---|---|
| Protein Names | Mitochondrial-processing peptidase subunit beta (EC 3.4.24.64) (Beta-MPP) (P-52) |
| Gene Symbol | Pmpcb |
| Organism | Mus musculus (Mouse) |
| Length | 489 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAALSRTL11LPEARRRLWG21FTRRLPLRRA31AAQPLYFGGD41RLRSTQAAPQ
51-10051VVLNVPETQV61TCLENGLRVA71SENSGLSTCT81VGLWIDAGSR91YENEKNNGTA
101-150101HFLEHMAFKG111TKKRSQLDLE121LEIENMGAHL131NAYTSREQTV141YYAKAFSRDL
151-200151PRAVEILADI161IQNSTLGEAE171IERERGVILR181EMQEVETNLQ191EVVFDYLHAT
201-250201AYQNTALGRT211ILGPTENIKS221INRKDLVDYI231TTHYKGPRIV241LAAAGGVCHN
251-300251ELLELAKFHF261GDSLCSHKGA271IPALPPCKFT281GSEIRVRDDK291MPLAHLAIAV
301-350301EAVGWAHPDT311ICLMVANTLI321GNWDRSFGGG331MNLSSKLAQL341TCHGNLCHSF
351-400351QSFNTSYTDT361GLWGLYMVCE371QATVADMLHV381VQNEWKRLCT391DVTESEVARA
401-450401KNLLKTNMLL411QLDGSTPICE421DIGRQMLCYN431RRIPIPELEA441RIDAVDAETV
451-489451RRVCTKYIHD461KSPAIAALGP471IERLPDFNQI481CSNMRWIRD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 62 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
|
| 79 | - | - | - |
Deep-Palm: 0.96
|
|
| 248 | SWISSPALM DBPTM CYSMODDB | Peptidase M16 inactive domain |
liver
(26165157)
|
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.97
|
| 265 | - | - | - |
Deep-Palm: 0.92
|
|
| 277 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.90
|
|
| 312 | - | - | - |
Deep-Palm: 0.71
|
|
| 342 | - | - | - |
Deep-Palm: 0.30
|
|
| 347 | - | - | - |
Deep-Palm: 0.30
|
|
| 369 | - | - | - |
Deep-Palm: 0.20
|
|
| 389 | SWISSPALM DBPTM CYSMODDB | Peptidase M16 inactive domain |
Liver
(28526873)
| - |
Deep-Palm: 0.93
|
| 419 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.82
|
| 428 | - | - | - |
Deep-Palm: 0.81
|
|
| 454 | - | - | - |
Deep-Palm: 0.97
|
|
| 481 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.571
4
Liver
Specificity: 0.308
4/4 (100.0%)
2
Testis
Specificity: 0.154
2/2 (100.0%)
1
Brain
Specificity: 0.077
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
6
Brain tissue (Mass)
Specificity: 0.462
6/56 (10.7%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.