Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CZ13 | Uqcrc1 | Cytochrome b-c1 complex subunit 1, … | Mus musculus (Mouse) | 480 aa |
Protein Details: Q9CZ13 (Uqcrc1)
Protein Information
| Accession | Q9CZ13 |
|---|---|
| Protein Names | Cytochrome b-c1 complex subunit 1, mitochondrial (Complex III subunit 1) (Core protein I) (Ubiquinol-cytochrome-c reductase complex core protein 1) |
| Gene Symbol | Uqcrc1 |
| Organism | Mus musculus (Mouse) |
| Length | 480 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAASAVCRAA11CSGTQVLLRT21RRSPALLRLP31ALRGTATFAQ41ALQSVPETQV
51-10051SILDNGLRVA61SEQSSHATCT71VGVWIDAGSR81YETEKNNGAG91YFLEHLAFKG
101-150101TKNRPGNALE111KEVESIGAHL121NAYSTREHTA131YLIKALSKDL141PKVVELLADI
151-200151VQNSSLEDSQ161IEKERDVILR171EMQENDASMQ181NVVFDYLHAT191AFQGTPLAQA
201-250201VEGPSENVRR211LSRTDLTDYL221NRHYKAPRMV231LAAAGGVEHQ241QLLDLAQKHL
251-300251SSVSRVYEED261AVPGLTPCRF271TGSEIRHRDD281ALPLAHVAIA291VEGPGWANPD
301-350301NVTLQVANAI311IGHYDCTYGG321GVHLSSPLAS331VAVANKLCQS341FQTFNISYSD
351-400351TGLLGAHFVC361DAMSIDDMVF371FLQGQWMRLC381TSATESEVTR391GKNILRNALV
401-450401SHLDGTTPVC411EDIGRSLLTY421GRRIPLAEWE431SRIQEVDAQM441LRDICSKYFY
451-480451DQCPAVAGYG461PIEQLPDYNR471IRSGMFWLRF
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.09
|
|
| 11 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.28
|
|
| 69 | Insulinase (Peptidase family M16) |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.95
|
|
| 268 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.91
|
| 316 | - | - | - |
Deep-Palm: 0.81
|
|
| 338 | - | - | - |
Deep-Palm: 0.90
|
|
| 360 | - | - | - |
Deep-Palm: 0.41
|
|
| 380 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
liver
(26165157)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.50
|
| 410 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
liver
(26165157)
|
Liver
(37925639)
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.97
|
| 445 | - | - | - |
Deep-Palm: 0.83
|
|
| 453 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.83
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.118
6/6 (100.0%)
5
Brain
Specificity: 0.098
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.950
38
Brain tissue (Mass)
Specificity: 0.745
38/56 (67.9%)
2
Liver tissue (Mass)
Specificity: 0.039
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.