Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CZB0 | Sdhc | Succinate dehydrogenase cytochrome b560 subunit, … | Mus musculus (Mouse) | 169 aa |
Protein Details: Q9CZB0 (Sdhc)
Protein Information
| Accession | Q9CZB0 |
|---|---|
| Protein Names | Succinate dehydrogenase cytochrome b560 subunit, mitochondrial (Integral membrane protein CII-3) (Malate dehydrogenase [quinone] cytochrome b560 subunit) (QPs-1) (QPs1) |
| Gene Symbol | Sdhc |
| Organism | Mus musculus (Mouse) |
| Length | 169 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31772009 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAFLLRHVS11RHCLRAHLNA21QLCIRNAAPL31GTTAKEEMER41FWKKNTSSNR
51-10051PLSPHLTIYK61WSLPMALSVC71HRGSGIALSG81GVSLFGLSAL91LLPGNFESYL
101-150101MFVKSLCLGP111TLIYSAKFVL121VFPLMYHSLN131GIRHLLWDLG141KGLAIPQVWL
151-169151SGVAVVVLAV161LSSGGLAAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 13 | - | - | - |
Deep-Palm: 0.28
|
|
| 23 | - | - | - |
Deep-Palm: 0.87
|
|
| 70 | SWISSPALM DBPTM CYSMODDB | Succinate dehydrogenase/Fumarate reductase transmembrane subunit |
Forebrain
(28680068)
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
| 107 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Liver
Specificity: 0.185
5/5 (100.0%)
3
Brain
Specificity: 0.111
3/3 (100.0%)
1
NSC
Specificity: 0.037
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.667
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.