Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CZU3 | Mtrex | Exosome RNA helicase MTR4 (EC … | Mus musculus (Mouse) | 1040 aa |
Protein Details: Q9CZU3 (Mtrex)
Protein Information
| Accession | Q9CZU3 |
|---|---|
| Protein Names | Exosome RNA helicase MTR4 (EC 3.6.4.13) (ATP-dependent helicase SKIV2L2) (Superkiller viralicidic activity 2-like 2) (TRAMP-like complex helicase) |
| Gene Symbol | Mtrex |
| Organism | Mus musculus (Mouse) |
| Length | 1040 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34884899 35477839 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADAFGDELF11SVFEDDSTSA21AGAKKDKEKE31KWKGPPGSAD41KAGKRLDTKL
51-10051QSESASGGKN61KRDLDVEGTD71EPIFGKKPRI81EDSINEDLSL91ADLMPRVKVQ
101-150101SVETVEGCTH111EVALPADEDY121IPLKPRVGKA131AKEYPFILDA141FQREAIQCVD
151-200151NNQSVLVSAH161TSAGKTVCAE171YAIALALREK181QRVIFTSPIK191ALSNQKYREM
201-250201YEEFQDVGLM211TGDVTINPTA221SCLVMTTEIL231RSMLYRGSEV241MREVAWVIFD
251-300251EIHYMRDSER261GVVWEETIIL271LPDNVHYVFL281SATIPNARQF291AEWICHLHKQ
301-350301PCHVIYTDYR311PTPLQHYIFP321AGGDGLHLVV331DENGDFREDN341FNTAMQVLRD
351-400351AGDLAKGDQK361GRKGGTKGPS371NVFKIVKMIM381ERNFQPVIIF391SFSKKDCEAY
401-450401ALQMTKLDFN411TDEEKKMVEE421VFNNAIDCLS431DEDKKLPQVE441HVLPLLKRGI
451-500451GIHHGGLLPI461LKETIEILFS471EGLIKALFAT481ETFAMGINMP491ARTVLFTNAR
501-550501KYDGKDFRWI511SSGEYIQMSG521RAGRRGMDDR531GIVILMVDEK541MSPTIGKQLL
551-600551KGSADPLNSA561FHLTYNMVLN571LLRVEEINPE581YMLEKSFYQF591QHYRAIPGVV
601-650601EKVKNSEEQY611NKIVIPNEEN621VVIYYKIRQQ631LAKLGKEIEE641YIHKPKYCLP
651-700651FLQPGRLVKV661KNEGDDFGWG671VVVNFSKKSN681VKPNSGELDP691LYVVEVLLRC
701-750701SKESLKNSAT711EAAKPAKPDE721KGEMQVVPVL731VHLLSAISTV741RLYIPKDLRP
751-800751VDNRQSVLKS761IQEVQRRFPD771GVPLLDPIDD781MGIQDQGLKK791VIQKVEAFEH
801-850801RMYSHPLHND811PNLETVYTLC821ERKAQIALDI831KSAKRELKKA841RTVLQMDELK
851-900851CRKRVLRRLG861FATSSDVIEM871KGRVACEISS881ADELLLTEMM891FNGLFNDLSS
901-950901EQATALLSCF911VFQENSSEMP921KLTEQLAGPL931RQMQECAKRI941AKVSAEAKLE
951-1000951IDEETYLSSF961KPHLMDVVYT971WATGATFAHI981CKMTDVFEGS991IIRCMRRLEE
1001-10401001LLRQMCQAAK1011AIGNTELENK1021FAEGITKIKR1031DIVFAASLYL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 108 | - | - | - |
Deep-Palm: 0.95
|
|
| 148 | - | - | - |
Deep-Palm: 0.53
|
|
| 168 | - | - | - |
Deep-Palm: 0.94
|
|
| 222 | - | - | - |
Deep-Palm: 0.71
|
|
| 295 | - | - | - |
Deep-Palm: 0.13
|
|
| 302 | - | - | - |
Deep-Palm: 0.06
|
|
| 397 | - | - | - |
Deep-Palm: 0.06
|
|
| 428 | - | - | - |
Deep-Palm: 0.85
|
|
| 648 | - | - | - |
Deep-Palm: 0.97
|
|
| 700 | - | - | - |
Deep-Palm: 0.98
|
|
| 820 | - | - | - |
Deep-Palm: 0.92
|
|
| 851 | - | - | - |
Deep-Palm: 0.96
|
|
| 876 | - | - | - |
Deep-Palm: 0.85
|
|
| 909 | - | - | - |
Deep-Palm: 0.89
|
|
| 936 | - | - | - |
Deep-Palm: 0.97
|
|
| 981 | - | - | - |
Deep-Palm: 0.15
|
|
| 994 | - | - | - |
Deep-Palm: 0.85
|
|
| 1006 | - | - | - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Testis
Specificity: 0.500
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.250
1/1 (100.0%)
1
Liver
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.