Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9CZX7 | Pip4p2 | Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase … | Mus musculus (Mouse) | 257 aa |
Protein Details: Q9CZX7 (Pip4p2)
Protein Information
| Accession | Q9CZX7 |
|---|---|
| Protein Names | Type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase (Type 2 PtdIns-4,5-P2 4-Ptase) (EC 3.1.3.78) (PtdIns-4,5-P2 4-Ptase II) (Transmembrane protein 55A) |
| Gene Symbol | Pip4p2 |
| Organism | Mus musculus (Mouse) |
| Length | 257 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 29733200 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAADGVDERS11PLLSASHSGN21VTPTAPPYLQ31ESSPRAELPP41PYTAIASPGT
51-10051SGIPVINCRV61CQSLINLDGK71LHQHVVKCTV81CNEATPIKTP91PTGKKYVRCP
101-150101CNCLLICKDT111SRRIGCPRPN121CRRIINLGPV131MLISEEQPAQ141PALPIQPEGT
151-200151RVVCGHCGNT161FLWMELRFNT171LAKCPHCKKI181SSVGSALPRR191RCCAYVTIGM
201-250201ICIFIAVGLT211VGTQDFSRRF221HATYVSWAIA231YLLGLICLIR241ACYWGAIRVS
251-257251YPEHGFA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 58 | - |
brain
(39008777)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.57
|
|
| 61 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.49
|
| 78 | - | - | - |
Deep-Palm: 0.43
|
|
| 81 | - | - | - |
Deep-Palm: 0.24
|
|
| 99 | - | - | - |
Deep-Palm: 0.63
|
|
| 101 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.63
|
| 103 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.75
|
| 107 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.38
|
| 116 | - | - | - |
Deep-Palm: 0.45
|
|
| 121 | - | - | - |
Deep-Palm: 0.52
|
|
| 154 | - | - | - |
Deep-Palm: 0.21
|
|
| 157 | - | - | - |
Deep-Palm: 0.29
|
|
| 174 | - | - | - |
Deep-Palm: 0.45
|
|
| 177 | - | - | - |
Deep-Palm: 0.62
|
|
| 192 | - | - | - |
Deep-Palm: 0.47
|
|
| 193 | - | - | - |
Deep-Palm: 0.70
|
|
| 202 | - | - | - |
Deep-Palm: 0.37
|
|
| 237 | - | - | - |
Deep-Palm: 0.79
|
|
| 242 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 55A |
Forebrain
(28680068)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.85
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
Liver
Specificity: 0.235
4/4 (100.0%)
2
Testis
Specificity: 0.118
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.059
1/1 (100.0%)
1
Brain
Specificity: 0.059
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.529
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.