Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D051 | Pdhb | Pyruvate dehydrogenase E1 component subunit … | Mus musculus (Mouse) | 359 aa |
Protein Details: Q9D051 (Pdhb)
Protein Information
| Accession | Q9D051 |
|---|---|
| Protein Names | Pyruvate dehydrogenase E1 component subunit beta, mitochondrial (PDHE1-B) (EC 1.2.4.1) |
| Gene Symbol | Pdhb |
| Organism | Mus musculus (Mouse) |
| Length | 359 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVVAGLVRG11PLRQASGLLK21RRFHRSAPAA31VQLTVREAIN41QGMDEELERD
51-10051EKVFLLGEEV61AQYDGAYKVS71RGLWKKYGDK81RIIDTPISEM91GFAGIAVGAA
101-150101MAGLRPICEF111MTFNFSMQAI121DQVINSAAKT131YYMSAGLQPV141PIVFRGPNGA
151-200151SAGVAAQHSQ161CFAAWYGHCP171GLKVVSPWNS181EDAKGLIKSA191IRDNNPVVML
201-250201ENELMYGVAF211ELPAEAQSKD221FLIPIGKAKI231ERQGTHITVV241AHSRPVGHCL
251-300251EAAAVLSKEG261IECEVINLRT271IRPMDIEAIE281ASVMKTNHLV291TVEGGWPQFG
301-350301VGAEICARIM311EGPAFNFLDA321PAVRVTGADV331PMPYAKVLED341NSVPQVKDII
351-359351FAVKKTLNI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 108 | - | - | - |
Deep-Palm: 0.85
|
|
| 161 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.57
|
|
| 169 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.21
|
|
| 249 | Transketolase C-terminal domain |
Brain
(34200797)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.96
|
|
| 263 | SWISSPALM DBPTM CYSMODDB | Transketolase C-terminal domain |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.92
Deep-Palm: 0.97
|
| 306 | - | - | - |
Deep-Palm: 0.82
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.120
6/6 (100.0%)
5
Brain
Specificity: 0.100
5/5 (100.0%)
2
Testis
Specificity: 0.040
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
37
Brain tissue (Mass)
Specificity: 0.740
37/56 (66.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.