Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D0I9 | Rars1 | Arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) … | Mus musculus (Mouse) | 660 aa |
Protein Details: Q9D0I9 (Rars1)
Protein Information
| Accession | Q9D0I9 |
|---|---|
| Protein Names | Arginine--tRNA ligase, cytoplasmic (EC 6.1.1.19) (Arginyl-tRNA synthetase) (ArgRS) |
| Gene Symbol | Rars1 |
| Organism | Mus musculus (Mouse) |
| Length | 660 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDGLVAQCSA11RLLQQEREIK21ALTAEIDRLK31NCGCLEASPS41LEQLREENLK
51-10051LKYRLNILRR61SLQEERRKPT71KNMININSRL81QEVFGCAIRA91AYPDLENPPL
101-150101IVTPSQQPKF111GDYQCNSAMG121ISQMLKAKEQ131KVSPREIAEN141ITKHLPNNKY
151-200151IDKVEIAGPG161FINVHLRKDF171VSEQLTSLLV181NGVQLPVLGD191KEKVIVDFSS
201-250201PNIAKEMHVG211HLRSTIIGES221MSRLFEFAGY231DVLRLNHVGD241WGTQFGMLIA
251-300251HLQDKFPDYL261TVSPPIGDLQ271AFYKESKKRF281DADEEFKKRA291YQCVVLLQSK
301-350301NPDIMKAWNL311ICDVSREEFK321KIYDALDITL331IERGESFYQD341RMKDIVKEFE
351-400351DKGFVQVDDG361RKIVFVPGCS371VPLTIVKSDG381GYTYDTSDLA391AIKQRLFEEK
401-450401ANKIIYVVDN411GQAIHFQTIF421AAAQMIGWYD431PKVTLVTHVG441FGVVLGEDKK
451-500451KFKTRSGETV461RLMDLLEEGL471KRSMDKLKEK481ERDKVLTEEE491LKAAQTSVAY
501-550501GCIKYADLSH511NRLNDYIFSF521DKMLDDRGNT531AAYLLYAFTR541IRSIARLANI
551-600551DEAMLQRAAR561ETKIILDHEK571EWKLGRCILR581FPEILQKILD591DLFLHTLCDY
601-650601IYELATTFTE611FYDSCYCVEK621DRQTGKVLKV631NMWRMLLCEA641VAAVMAKGFD
651-660651ILGIKPVQRM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 8 | - | - | - |
Deep-Palm: 0.17
|
|
| 32 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.97
|
|
| 34 | - |
MLE
(39008777)
| - |
Deep-Palm: 0.97
|
|
| 86 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.90
Deep-Palm: 0.67
|
| 115 | - | - | - |
Deep-Palm: 0.59
|
|
| 293 | - | - | - |
Deep-Palm: 0.92
|
|
| 312 | SWISSPALM DBPTM CYSMODDB | tRNA synthetases class I (R) catalytic domain |
Liver
(28526873)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.79
|
| 369 | SWISSPALM DBPTM CYSMODDB | tRNA synthetases class I (R) catalytic domain |
Liver
(28526873)
| - |
GPS-Palm: 0.94
Deep-Palm: 0.81
|
| 502 | SWISSPALM DBPTM CYSMODDB | tRNA synthetases class I (R) catalytic domain |
Liver
(28526873)
| - |
GPS-Palm: 0.89
Deep-Palm: 0.94
|
| 577 | - | - | - |
Deep-Palm: 0.97
|
|
| 598 | - | - | - |
Deep-Palm: 0.18
|
|
| 615 | - | - | - |
Deep-Palm: 0.50
|
|
| 617 | - | - | - |
Deep-Palm: 0.40
|
|
| 638 | - | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.462
6/6 (100.0%)
2
Testis
Specificity: 0.154
2/2 (100.0%)
1
Raw 264.7
Specificity: 0.077
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Brain tissue (Mass)
Specificity: 0.308
4/56 (7.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.