Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D0T1 | Snu13 | NHP2-like protein 1 (Fertilization antigen … | Mus musculus (Mouse) | 128 aa |
Protein Details: Q9D0T1 (Snu13)
Protein Information
| Accession | Q9D0T1 |
|---|---|
| Protein Names | NHP2-like protein 1 (Fertilization antigen 1) (FA-1) (High mobility group-like nuclear protein 2 homolog 1) (Sperm-specific antigen 1) (U4/U6.U5 small nuclear ribonucleoprotein SNU13) (U4/U6.U5 tri-snRNP 15.5 kDa protein) [Cleaved into: NHP2-like protein 1, N-terminally processed] |
| Gene Symbol | Snu13 |
| Organism | Mus musculus (Mouse) |
| Length | 128 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTEADVNPKA11YPLADAHLTK21KLLDLVQQSC31NYKQLRKGAN41EATKTLNRGI
51-10051SEFIVMAADA61EPLEIILHLP71LLCEDKNVPY81VFVRSKQALG91RACGVSRPVI
101-128101ACSVTIKEGS111QLKQQIQSIQ121QSIERLLV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 30 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein eL30-like superfamily H/ACA ribonucleoprotein complex, subunit Nhp2-like |
Liver
(28526873)
| - |
GPS-Palm: 0.95
Deep-Palm: 0.98
|
| 73 | - | - | - |
Deep-Palm: 0.89
|
|
| 93 | - | - | - |
Deep-Palm: 0.93
|
|
| 102 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Liver
Specificity: 0.500
2/2 (100.0%)
2
Testis
Specificity: 0.500
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.