Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D172 | Gatd3 | Glutamine amidotransferase-like class 1 domain-containing … | Mus musculus (Mouse) | 266 aa |
Protein Details: Q9D172 (Gatd3)
Protein Information
| Accession | Q9D172 |
|---|---|
| Protein Names | Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial |
| Gene Symbol | Gatd3 |
| Organism | Mus musculus (Mouse) |
| Length | 266 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAVRVLVAP11RLASALLPLS21RYHRAPSQRA31ALHSSAPRPG41ARVALVLSGC
51-10051GVYDGTEIHE61ASAILVHLSR71GGAEVQIFAP81DVPQMHVIDH91TKGEPSERES
101-150101RNVLAESARI111ARGKITSLAQ121LNAANHDAAI131FPGGFGAAKN141LSTFAVDGKD
151-200151CKVNKEVERV161LKEFHGAKKP171IGLCCIAPVL181AAKVIKGVEV191TVGHEQEEGG
201-250201KWPYAGTAEA211IKALGAKHCV221KGVTEAHVDQ231KNKVVTTPAF241MCETALHHIH
251-266251DGIGAMVKNV261LELTGK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 50 | Class I glutamine amidotransferase-like ES1 PROTEIN HOMOLOG, MITOCHONDRIAL | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.97
|
|
| 151 | - |
brain
(39008777)
| - |
GPS-Palm: 0.82
Deep-Palm: 0.97
|
|
| 174 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(34200797)
liver
(26165157)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
| 175 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
| 219 | - | - | - |
Deep-Palm: 0.96
|
|
| 242 | - |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.12
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
4
Liver
Specificity: 0.103
4/4 (100.0%)
4
Brain
Specificity: 0.103
4/4 (100.0%)
2
Testis
Specificity: 0.051
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
29
Brain tissue (Mass)
Specificity: 0.744
29/56 (51.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.