Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D404 | Oxsm | 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial (EC 2.3.1.41) … | Mus musculus (Mouse) | 459 aa |
Protein Details: Q9D404 (Oxsm)
Protein Information
| Accession | Q9D404 |
|---|---|
| Protein Names | 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase) |
| Gene Symbol | Oxsm |
| Organism | Mus musculus (Mouse) |
| Length | 459 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLSKCLQHFL11KATISHPYPA21SYSWLISKHR31FYGTVPAAML41RRRVVITGIG
51-10051LVTPLGVGTQ61LVWDRLLRGE71SGIVSVVGDE81YKNIPCSVAA91YVPRGPHEGQ
101-150101FNEENFVSKS111DAKSMSSSTI121MAVGAAELAL131KDSGWHPKRE141ADQVATGVAI
151-200151GMGMVPLEVI161SETALLFQTK171GYNKVSPFFV181PKILINMAAG191QVSIRYKLKG
201-250201PNHSVSTACT211TGAHAVGDSF221RFIAHGDADV231MVAGGTDSCI241SPLSLAGFSR
251-300251ARALSSNPDP261KLACRPFHPE271RDGFVMGEGA281AVLVLEEHEH291AVQRGARIYA
301-350301EILGYGLSGD311AGHITAPDPE321GEGALRCMAA331AVKDAGVSPE341QISYVNAHAT
351-400351STPLGDAAEN361RAIKRLFRDH371ACALAISSTK381GATGHLLGAA391GAVEATFTAL
401-450401ACYHQKLPPT411LNLDCTEPEF421DLNYVPLESQ431EWKAEGRCIG441LTNSFGFGGT
451-459451NATLCIAGM
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 5 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.02
|
|
| 86 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.86
|
| 209 | Beta-ketoacyl synthase N-terminal domain |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.93
|
|
| 239 | - | - | - |
Deep-Palm: 0.98
|
|
| 264 | SWISSPALM DBPTM CYSMODDB | Beta-ketoacyl synthase N-terminal domain |
Liver
(28526873)
| - |
Deep-Palm: 0.95
|
| 327 | - | - | - |
Deep-Palm: 0.97
|
|
| 372 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.89
|
|
| 402 | - | - | - |
Deep-Palm: 0.98
|
|
| 415 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.70
|
|
| 438 | - | - | - |
Deep-Palm: 0.81
|
|
| 455 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.286
6/6 (100.0%)
3
Brain
Specificity: 0.143
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.917
11
Brain tissue (Mass)
Specificity: 0.524
11/56 (19.6%)
1
Liver tissue (Mass)
Specificity: 0.048
1/8 (12.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.