Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D5T0 | Atad1 | Outer mitochondrial transmembrane helix translocase … | Mus musculus (Mouse) | 361 aa |
Protein Details: Q9D5T0 (Atad1)
Protein Information
| Accession | Q9D5T0 |
|---|---|
| Protein Names | Outer mitochondrial transmembrane helix translocase (EC 7.4.2.-) (ATPase family AAA domain-containing protein 1) (Thorase) |
| Gene Symbol | Atad1 |
| Organism | Mus musculus (Mouse) |
| Length | 361 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 34200797 34884899 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVHAEAFSRP11LSRNEVVGLI21FRLTIFGAVT31YFTIKWMVDA41IDPTRKQKVE
51-10051AQKQAEKLMK61QIGVKNVKLS71EYEMSIAAHL81VDPLNMHVTW91SDIAGLDDVI
101-150101TDLKDTVILP111IKKKHLFENS121RLLQPPKGVL131LYGPPGCGKT141LIAKATAKEA
151-200151GCRFINLQPS161TLTDKWYGES171QKLAAAVFSL181AIKLQPSIIF191IDEIDSFLRN
201-250201RSSSDHEATA211MMKAQFMSLW221DGLDTDHSCQ231VIVMGATNRP241QDLDSAIMRR
251-300251MPTRFHINQP261ALKQREAILK271LILKNENVDR281HVDLLEVAQE291TDGFSGSDLK
301-350301EMCRDAALLC311VREYVNSTSE321ESHDEDEIRP331VQQQDLHRAI341EKMKKSKDAA
351-361351FQNVLTHVCL361D
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 137 | SWISSPALM DBPTM CYSMODDB | ATPase family associated with various cellular activities (AAA) |
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
| 152 | - | - | - |
Deep-Palm: 0.96
|
|
| 229 | - | - | - |
Deep-Palm: 0.63
|
|
| 303 | - | - | - |
Deep-Palm: 0.94
|
|
| 310 | - | - | - |
Deep-Palm: 0.93
|
|
| 359 | - |
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.545
6
Liver
Specificity: 0.231
6/6 (100.0%)
3
Brain
Specificity: 0.115
3/3 (100.0%)
2
Testis
Specificity: 0.077
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.577
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.