Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D819 | Ppa1 | Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate … | Mus musculus (Mouse) | 289 aa |
Protein Details: Q9D819 (Ppa1)
Protein Information
| Accession | Q9D819 |
|---|---|
| Protein Names | Inorganic pyrophosphatase (EC 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) |
| Gene Symbol | Ppa1 |
| Organism | Mus musculus (Mouse) |
| Length | 289 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSGFSSEERA11APFTLEYRVF21LKNEKGQYIS31PFHDVPIYAD41KDVFHMVVEV
51-10051PRWSNAKMEI61ATKDPLNPIK71QDVKKGKLRY81VANLFPYKGY91IWNYGAIPQT
101-150101WEDPGHSDKH111TGCCGDNDPI121DVCEIGSKVC131ARGEIIRVKV141LGILAMIDEG
151-200151ETDWKVIAIN161VDDPDAANYK171DISDVERLKP181GYLEATVDWF191RRYKVPDGKP
201-250201ENEFAFNAEF211KNKDFAVDII221KSTHDYWKAL231VTKKTDGKGI241SCMNTTVSES
251-289251PFKCDPDAAK261AIVDALPPPC271ESACSLPTDV281DKWFHQQKN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 113 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.06
|
|
| 114 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.06
|
|
| 123 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.16
|
|
| 130 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.77
|
|
| 242 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.83
|
| 254 | - | - | - |
Deep-Palm: 0.49
|
|
| 270 | - |
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.94
|
|
| 274 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
MLE
(39008777)
|
Brain
(35358180)
|
Deep-Palm: 0.71
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Liver
Specificity: 0.167
5/5 (100.0%)
3
Brain
Specificity: 0.100
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.909
20
Brain tissue (Mass)
Specificity: 0.667
20/56 (35.7%)
2
Liver tissue (Mass)
Specificity: 0.067
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.