Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D898 | Arpc5l | Actin-related protein 2/3 complex subunit … | Mus musculus (Mouse) | 153 aa |
Protein Details: Q9D898 (Arpc5l)
Protein Information
| Accession | Q9D898 |
|---|---|
| Protein Names | Actin-related protein 2/3 complex subunit 5-like protein (Arp2/3 complex 16 kDa subunit 2) (ARC16-2) |
| Gene Symbol | Arpc5l |
| Organism | Mus musculus (Mouse) |
| Length | 153 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARNTLSSRF11RRVDIDEFDE21NKFVDEHEEA31AAAAGEPGPD41PCEVDGLLRQ
51-10051GDMLRAFHAA61LRNSPINTKN71QAVKERAQGV81VLKVLTNFKS91SEIEQAVQSL
101-150101DRNGIDLLMK111YIYKGFEKPT121ENSSAVLLQW131HEKALAVGGL141GSIIRVLTAR
151-153151KTV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 42 | Actin-related protein 2/3 complex subunit 5 superfamily |
Brain
(34200797)
|
Brain
(35358180)
|
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.045
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
21
Brain tissue (Mass)
Specificity: 0.955
21/56 (37.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.