Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D8B4 | Ndufa11 | NADH dehydrogenase [ubiquinone] 1 alpha … | Mus musculus (Mouse) | 141 aa |
Protein Details: Q9D8B4 (Ndufa11)
Protein Information
| Accession | Q9D8B4 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 (Complex I-B14.7) (CI-B14.7) (NADH-ubiquinone oxidoreductase subunit B14.7) |
| Gene Symbol | Ndufa11 |
| Organism | Mus musculus (Mouse) |
| Length | 141 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 34200797 35358180 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVKRFFESYH11EVPDGTQCHR21KTYITTALGG31ICGIIGSAYR41VSLNPADSTL
51-10051EAVARVGRYT61FTAAAIGAMF71GLTTCVSAQV81REKPDDPLNY91FIGGCAGGLT
101-141101LGARTHSYGT111AAMGCVYMGT121AAALFKIGKL131EGWELFPTPK141V
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 18 | - |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.34
|
|
| 32 | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 | - | - |
Deep-Palm: 0.76
|
|
| 75 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.83
|
|
| 95 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.92
|
| 115 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Brain
Specificity: 0.140
6/6 (100.0%)
1
Liver
Specificity: 0.023
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.972
35
Brain tissue (Mass)
Specificity: 0.814
35/56 (62.5%)
1
Liver tissue (Mass)
Specificity: 0.023
1/8 (12.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.