Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D8T2 | Gsdmd | Gasdermin-D (Gasdermin domain-containing protein 1) … | Mus musculus (Mouse) | 487 aa |
Protein Details: Q9D8T2 (Gsdmd)
Protein Information
| Accession | Q9D8T2 |
|---|---|
| Protein Names | Gasdermin-D (Gasdermin domain-containing protein 1) [Cleaved into: Gasdermin-D, N-terminal (GSDMD-NT) (mGSDMD-NTD) (p30); Gasdermin-D, C-terminal (GSDMD-CT) (mGSDMD-CTD) (p20); Gasdermin-D, p13 (Gasdermin-D, 13 kDa) (13 kDa GSDMD); Gasdermin-D, p40] |
| Gene Symbol | Gsdmd |
| Organism | Mus musculus (Mouse) |
| Length | 487 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 37925639 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPSAFEKVVK11NVIKEVSGSR21GDLIPVDSLR31NSTSFRPYCL41LNRKFSSSRF
51-10051WKPRYSCVNL61SIKDILEPSA71PEPEPECFGS81FKVSDVVDGN91IQGRVMLSGM
101-150101GEGKISGGAA111VSDSSSASMN121VCILRVTQKT131WETMQHERHL141QQPENKILQQ
151-200151LRSRGDDLFV161VTEVLQTKEE171VQITEVHSQE181GSGQFTLPGA191LCLKGEGKGH
201-250201QSRKKMVTIP211AGSILAFRVA221QLLIGSKWDI231LLVSDEKQRT241FEPSSGDRKA
251-300251VGQRHHGLNV261LAALCSIGKQ271LSLLSDGIDE281EELIEAADFQ291GLYAEVKACS
301-350301SELESLEMEL311RQQILVNIGK321ILQDQPSMEA331LEASLGQGLC341SGGQVEPLDG
351-400351PAGCILECLV361LDSGELVPEL371AAPIFYLLGA381LAVLSETQQQ391LLAKALETTV
401-450401LSKQLELVKH411VLEQSTPWQE421QSSVSLPTVL431LGDCWDEKNP441TWVLLEECGL
451-487451RLQVESPQVH461WEPTSLIPTS471ALYASLFLLS481SLGQKPC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 39 | Gasdermin Gasdermin, pore forming domain | - | - |
Deep-Palm: 0.84
|
|
| 57 | - | - | - |
Deep-Palm: 0.79
|
|
| 77 | - | - | - |
Deep-Palm: 0.69
|
|
| 122 | - | - | - |
Deep-Palm: 0.77
|
|
| 192 | SWISSPALM | Gasdermin pore forming domain | - | - |
Deep-Palm: 0.96
|
| 265 | - | - | - |
Deep-Palm: 0.96
|
|
| 299 | - | - | - |
Deep-Palm: 0.94
|
|
| 340 | - | - | - |
Deep-Palm: 0.97
|
|
| 354 | - | - | - |
Deep-Palm: 0.97
|
|
| 358 | - | - | - |
Deep-Palm: 0.98
|
|
| 434 | - | - | - |
Deep-Palm: 0.91
|
|
| 448 | - | - | - |
Deep-Palm: 0.61
|
|
| 487 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
4
Liver
Specificity: 1.000
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.