Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D8T7 | Slirp | SRA stem-loop-interacting RNA-binding protein, mitochondrial | Mus musculus (Mouse) | 112 aa |
Protein Details: Q9D8T7 (Slirp)
Protein Information
| Accession | Q9D8T7 |
|---|---|
| Protein Names | SRA stem-loop-interacting RNA-binding protein, mitochondrial |
| Gene Symbol | Slirp |
| Organism | Mus musculus (Mouse) |
| Length | 112 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAASAIKGLS11ALRSSTGRPI21AFVRKIPWTA31AASELREHFA41QFGHVRRCTV
51-10051PFDKETGFHR61GMGWVQFSSQ71EELQNALQQE81HHIIDGVKIH91VQAQRAKALH
101-112101GAQTSDEERF111LR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 48 | SWISSPALM DBPTM CYSMODDB | Nucleotide-binding alpha-beta plait domain superfamily RNA recognition motif RNA-binding domain superfamily SRA stem-loop-interacting RNA-binding protein/Glycine-rich RNA-binding-like RNA recognition motif domain |
liver
(26165157)
| - |
Deep-Palm: 0.72
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Testis
Specificity: 0.500
2/2 (100.0%)
2
Liver
Specificity: 0.500
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.