Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9D8W5 | Psmd12 | 26S proteasome non-ATPase regulatory subunit … | Mus musculus (Mouse) | 456 aa |
Protein Details: Q9D8W5 (Psmd12)
Protein Information
| Accession | Q9D8W5 |
|---|---|
| Protein Names | 26S proteasome non-ATPase regulatory subunit 12 (26S proteasome regulatory subunit RPN5) (26S proteasome regulatory subunit p55) |
| Gene Symbol | Psmd12 |
| Organism | Mus musculus (Mouse) |
| Length | 456 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADGGSERAD11GRIVKMEVDY21SATVDQRLPE31CEKLAKEGRL41QEVIETLLSL
51-10051EKQTRTASDM61VSTSRILVAV71VKMCYEAKEW81DLLNENIMLL91SKRRSQLKQA
101-150101VAKMVQQCCT111YVEEITDLPV121KLRLIDTLRM131VTEGKIYVEI141ERARLTKTLA
151-200151TIKEQNGDVK161EAASILQELQ171VETYGSMEKK181ERVEFILEQM191RLCLAVKDYI
201-250201RTQIISKKIN211TKFFQEENTE221NLKLKYYNLM231IQLDQHEGSY241LSICKHYRAI
251-300251YDTPCIQAES261DKWQQALKSV271VLYVILAPFD281NEQSDLVHRI291SSDKKLEEIP
301-350301KYKDLLKLFT311TMELMRWSTL321VEDYGVELRK331GSSETPATDV341FSSTEEGEKR
351-400351WKDLKSRVVE361HNIRIMAKYY371TRITMKRMAQ381LLDLSVDESE391AFLSNLVVNK
401-450401TIFAKVDRLA411GVINFQRPKD421PNNLLNDWSQ431KLNSLMSLVN441KTTHLIAKEE
451-456451MIHNLQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 31 | - | - | - |
Deep-Palm: 0.98
|
|
| 74 | - | - | - |
Deep-Palm: 0.54
|
|
| 108 | - | - | - |
Deep-Palm: 0.90
|
|
| 109 | - | - | - |
Deep-Palm: 0.91
|
|
| 193 | - | - | - |
Deep-Palm: 0.84
|
|
| 244 | - | - | - |
Deep-Palm: 0.22
|
|
| 255 | SWISSPALM DBPTM CYSMODDB | PSMD12/CSN4 N-terminal |
Liver
(28526873)
| - |
Deep-Palm: 0.60
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.