Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DB26 | Phyhd1 | Phytanoyl-CoA dioxygenase domain-containing protein 1 … | Mus musculus (Mouse) | 291 aa |
Protein Details: Q9DB26 (Phyhd1)
Protein Information
| Accession | Q9DB26 |
|---|---|
| Protein Names | Phytanoyl-CoA dioxygenase domain-containing protein 1 (Protein PHYHD1) (EC 1.14.11.-) |
| Gene Symbol | Phyhd1 |
| Organism | Mus musculus (Mouse) |
| Length | 291 aa |
| Isoforms | No isoforms |
| Related PMIDs | 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MACLSPSQLK11KFQEDGFLLL21EGFFTADECV31AMQQRIGEIV41AEMDVPLHCR
51-10051TEFSTQEDEQ61LQTQGKTDYF71LSSGDKIRFF81FEKGVFDEKG91NFLVPPEKSI
101-150101NKIGHALHAH111DPVFRSITHS121PKVQALVRSL131GLQMPVVVQS141MYIFKQPHFG
151-200151GEVSPHQDAT161FLYTEPLGRV171LGLWIAMEDA181MLENGCLWFI191PGSHTRGVSR
201-250201RMIRAPSDSG211PGTSFLGSDP221AWASNLFVPL231PVRRGGLVLI241HGEVVHKSEQ
251-291251NHSDHSRQAY261TVHLMEAAGT271VWSPGNWLQP281TPELPFPPLY291S
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | Clavaminate synthase-like q2cbj1 9rhob like domain | - |
NSC
(31772009)
|
GPS-Palm: 0.98
Deep-Palm: 0.02
|
|
| 29 | Clavaminate synthase-like q2cbj1 9rhob like domain Phytanoyl-CoA dioxygenase-like | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
|
| 49 | SWISSPALM DBPTM CYSMODDB | q2cbj1 9rhob like domain | - | - |
Deep-Palm: 0.36
|
| 186 | - | - | - |
Deep-Palm: 0.61
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Liver
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.