Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DBG1 | Cyp27a1 | Sterol 26-hydroxylase, mitochondrial (EC 1.14.15.15) … | Mus musculus (Mouse) | 533 aa |
Protein Details: Q9DBG1 (Cyp27a1)
Protein Information
| Accession | Q9DBG1 |
|---|---|
| Protein Names | Sterol 26-hydroxylase, mitochondrial (EC 1.14.15.15) (5-beta-cholestane-3-alpha,7-alpha,12-alpha-triol 26-hydroxylase) (Cytochrome P-450C27/25) (Cytochrome P450 27) (Sterol 27-hydroxylase) (Vitamin D(3) 25-hydroxylase) |
| Gene Symbol | Cyp27a1 |
| Organism | Mus musculus (Mouse) |
| Length | 533 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAWSRTRLR11WTLLDPRVVG21RGLCPQGARA31KATIPAALQA41QESTEGPGTG
51-10051QDRPRLRSPA61ELPGTGTLQF71LFQLFLQGYV81LHLPDLQVLN91KTKYGPMWTT
101-150101SFGTYTNVNL111ASAPLLEQVM121RQEGKYPIRD131HMDQWKDHRD141HKGLTYGIFI
151-200151AQGEQWYHLR161QALKQRLLKP171DEAALYTDAL181NEVISDFITR191LDQVRAESES
201-250201GDQVPDMAHL211LYHLALEAIT221YILFEKRIGC231LKPSIPEDTA241AFIRSVAIMF
251-300251QNSVYITFLP261KWTRPLLPFW271KRYLNGWDNI281FSFGKKLIDE291KVQELKAQLQ
301-350301ETGPDGVRVS311GYLHFLLTNE321LLSTQETIGT331FPELLLAGVD341TTSNTLTWAL
351-400351YHLSKSPEIQ361EALHKEVTGV371VPFGKVPQHK381DFAHMPLLKA391VIKETLRLYP
401-450401VVPTNSRIIT411EKETEINGFL421FPKNTQFVLC431HYVVSRDPSV441FPEPNSFQPH
451-500451RWLRKKEADN461PGILHPFGSV471PFGYGVRSCL481GRRIAELEMQ491LMLSRLVQKY
501-533501EIALAPGMGE511VKTVSRIVLV521PSKKVRLHFL531QRQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 24 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 230 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
liver
(26165157)
| - |
GPS-Palm: 0.93
Deep-Palm: 0.94
|
| 430 | SWISSPALM DBPTM CYSMODDB | Cytochrome P450 |
liver
(26165157)
Liver
(28526873)
| - |
Deep-Palm: 0.90
|
| 479 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.857
6
Liver
Specificity: 0.857
6/6 (100.0%)
1
Testis
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.