Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DBG7 | Srpra | Signal recognition particle receptor subunit … | Mus musculus (Mouse) | 636 aa |
Protein Details: Q9DBG7 (Srpra)
Protein Information
| Accession | Q9DBG7 |
|---|---|
| Protein Names | Signal recognition particle receptor subunit alpha (SR-alpha) (Docking protein alpha) (DP-alpha) |
| Gene Symbol | Srpra |
| Organism | Mus musculus (Mouse) |
| Length | 636 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLDFFTIFSK11GGLVLWCFQG21VSDSCTGPVN31ALIRSVLLQE41RGGNNSFTHE
51-10051ALTLKYKLDN61QFELVFVVGF71QKILTLTYVD81KLIDDVHRLF91RDKYRTEIQQ
101-150101QSALSLLNGT111FDFQNDFLRL121LREAEESSKI131RAPTTMKKFE141DSEKAKKPVR
151-200151SMIETRGEKT161KEKAKNNKKR171GAKKEGSDGT181LATSKTAPAE191KSGLSAGPEN
201-250201GELSKEELIR211RKREEFIQKH221GKGLDKSSKS231TKSDTPKEKG241KKAPRVWELG
251-300251GCANKEVLDY261STPTTNGTPE271AALSEDINLI281RGTGPGGQLQ291DLDCSSSDDE
301-350301GATQNTKPSA311TKGTLGGMFG321MLKGLVGSKS331LSREDMESVL341DKMRDHLIAK
351-400351NVAADIAVQL361CESVANKLEG371KVMGTFSTVT381STVKQALQES391LVQILQPQRR
401-450401VDMLRDIMDA411QRRQRPYVVT421FCGVNGVGKS431TNLAKISFWL441LENGFSVLIA
451-500451ACDTFRAGAV461EQLRTHTRRL471TALHPPEKHG481GRTMVQLFEK491GYGKDAAGIA
501-550501MEAIAFARNQ511GFDVVLVDTA521GRMQDNAPLM531TALAKLITVN541TPDLVLFVGE
551-600551ALVGNEAVDQ561LVKFNRALAD571HSMAQTPRLI581DGIVLTKFDT591IDDKVGAAIS
601-636601MTYITSKPIV611FVGTGQTYCD621LRSLNAKAVV631AALMKA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | SR alpha SRX Longin-like domain superfamily | - | - |
Deep-Palm: 0.80
|
|
| 25 | SR alpha SRX Longin-like domain superfamily | - | - |
Deep-Palm: 0.97
|
|
| 252 | SWISSPALM DBPTM CYSMODDB | Signal recognition particle alpha subunit N-terminal |
Liver
(28526873)
| - |
GPS-Palm: 0.91
Deep-Palm: 0.97
|
| 294 | - | - | - |
Deep-Palm: 0.94
|
|
| 361 | SWISSPALM DBPTM CYSMODDB | SRP54-type protein helical bundle domain |
Liver
(28526873)
|
NSC
(31772009)
|
Deep-Palm: 0.95
|
| 422 | - | - | - |
Deep-Palm: 0.83
|
|
| 452 | - | - | - |
Deep-Palm: 0.97
|
|
| 619 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.667
4/4 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.