Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DBM0 | Abcg8 | ATP-binding cassette sub-family G member … | Mus musculus (Mouse) | 673 aa |
Protein Details: Q9DBM0 (Abcg8)
Protein Information
| Accession | Q9DBM0 |
|---|---|
| Protein Names | ATP-binding cassette sub-family G member 8 (EC 7.6.2.-) (Sterolin-2) |
| Gene Symbol | Abcg8 |
| Organism | Mus musculus (Mouse) |
| Length | 673 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAEKTKEETQ11LWNGTVLQDA21SQGLQDSLFS31SESDNSLYFT41YSGQSNTLEV
51-10051RDLTYQVDIA61SQVPWFEQLA71QFKIPWRSHS81SQDSCELGIR91NLSFKVRSGQ
101-150101MLAIIGSSGC111GRASLLDVIT121GRGHGGKMKS131GQIWINGQPS141TPQLVRKCVA
151-200151HVRQHDQLLP161NLTVRETLAF171IAQMRLPRTF181SQAQRDKRVE191DVIAELRLRQ
201-250201CANTRVGNTY211VRGVSGGERR221RVSIGVQLLW231NPGILILDEP241TSGLDSFTAH
251-300251NLVTTLSRLA261KGNRLVLISL271HQPRSDIFRL281FDLVLLMTSG291TPIYLGAAQQ
301-350301MVQYFTSIGH311PCPRYSNPAD321FYVDLTSIDR331RSKEREVATV341EKAQSLAALF
351-400351LEKVQGFDDF361LWKAEAKELN371TSTHTVSLTL381TQDTDCGTAV391ELPGMIEQFS
401-450401TLIRRQISND411FRDLPTLLIH421GSEACLMSLI431IGFLYYGHGA441KQLSFMDTAA
451-500451LLFMIGALIP461FNVILDVVSK471CHSERSMLYY481ELEDGLYTAG491PYFFAKILGE
501-550501LPEHCAYVII511YAMPIYWLTN521LRPVPELFLL531HFLLVWLVVF541CCRTMALAAS
551-600551AMLPTFHMSS561FFCNALYNSF571YLTAGFMINL581DNLWIVPAWI591SKLSFLRWCF
601-650601SGLMQIQFNG611HLYTTQIGNF621TFSILGDTMI631SAMDLNSHPL641YAIYLIVIGI
651-673651SYGFLFLYYL661SLKLIKQKSI671QDW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 85 | - | - | - |
Deep-Palm: 0.86
|
|
| 110 | SWISSPALM DBPTM CYSMODDB | ABC transporter |
Liver
(28526873)
| - |
GPS-Palm: 0.92
Deep-Palm: 0.98
|
| 148 | - | - | - |
Deep-Palm: 0.45
|
|
| 201 | - | - | - |
Deep-Palm: 0.98
|
|
| 312 | - | - | - |
Deep-Palm: 0.09
|
|
| 386 | - | - | - |
Deep-Palm: 0.66
|
|
| 425 | - | - | - |
Deep-Palm: 0.71
|
|
| 471 | - | - | - |
Deep-Palm: 0.64
|
|
| 505 | - | - | - |
Deep-Palm: 0.07
|
|
| 541 | - | - | - |
Deep-Palm: 0.80
|
|
| 542 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.83
|
|
| 563 | - | - | - |
Deep-Palm: 0.15
|
|
| 599 | - | - | - |
Deep-Palm: 0.21
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.