Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DBR4 | Apbb2 | Amyloid beta precursor protein binding … | Mus musculus (Mouse) | 760 aa |
Protein Details: Q9DBR4 (Apbb2)
Protein Information
| Accession | Q9DBR4 |
|---|---|
| Protein Names | Amyloid beta precursor protein binding family B member 2 (Amyloid-beta (A4) precursor protein-binding family B member 2) (Protein Fe65-like 1) |
| Gene Symbol | Apbb2 |
| Organism | Mus musculus (Mouse) |
| Length | 760 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSEVLPADSG11VGTLAVFMAS21SGSTDIANRN31SPATPPNTLN41LRSSHNELLN
51-10051AEIKHSDAKN61STPPKCRKKY71ALTNIQAAMG81LSDPAVQPLL91GNGSANIKLV
101-150101KNGENQLRKA111AEQGQQDPNK121NLSPAAVINL131TSEKLEVKDP141HPQESSGCEI
151-200151LPSQPRRTKS161FLNYYADLET171SARELGQNLG181PCQGVGEEKA191QPGPGQAPVV
201-250201IGNGDLLPQK211PNKPQSSPED221GQVATVSSSP231ETKKDHPKTG241AKTDCALHRI
251-300251QNLAPSDEES261SWTTLSQDSA271SPSSPDETDI281WSDHSFQTDP291DLPPGWKRVN
301-350301DIAGTYYWHI311PTGTTQWERP321VSIPADLHGS331RKGSLSSVTP341SPTPENEKQP
351-400351WSDFAVLNGG361KINSDIWKDL371HAATVNPDPS381LKEFEGATLR391YASLKLRNAP
401-450401HGDDDDSCSI411NSDPEAKCFA421VRSLGWVEMA431EEDLAPGKSS441VAVNNCIRQL
451-500451SYCKNDIRDT461VGIWGEGKDM471YLSLENDMLS481LVDPMDRSVL491HSQPIVNIRV
501-550501WGVGRDNGRE511RDFAYVARDK521DTRILKCHVF531RCDTPAKAIA541TSLHEICSKI
551-600551MAERKNAKAL561ACSSLQERTN571MSLDVPLQVD581FPTPKTELVQ591KFRVQYLGML
601-650601PVDRPVGMDT611LNSAIENLMT621SSSKEDWPSV631NMNVADATVT641VISEKNEEEV
651-700651LVECRVRFLS661FMGVGKDVHT671FAFIMDTGNQ681RFECHVFWCE691PNAANVSEAV
701-750701QAACMLRYQK711CLVARPPSQK721VRPPPPPADS731VTRRVTTNVK741RGVLSLIDTL
751-760751KQKRPVTETP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 66 | - | - | - |
Deep-Palm: 0.46
|
|
| 148 | - | - | - |
Deep-Palm: 0.90
|
|
| 182 | - | - | - |
Deep-Palm: 0.93
|
|
| 245 | - | - | - |
Deep-Palm: 0.82
|
|
| 408 | - | - | - |
Deep-Palm: 0.48
|
|
| 418 | - | - | - |
Deep-Palm: 0.20
|
|
| 446 | - | - | - |
Deep-Palm: 0.64
|
|
| 453 | - | - | - |
Deep-Palm: 0.51
|
|
| 527 | - | - | - |
Deep-Palm: 0.39
|
|
| 532 | - | - | - |
Deep-Palm: 0.30
|
|
| 547 | - | - | - |
Deep-Palm: 0.92
|
|
| 562 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.95
|
|
| 654 | - | - | - |
Deep-Palm: 0.74
|
|
| 684 | - | - | - |
Deep-Palm: 0.03
|
|
| 689 | - | - | - |
Deep-Palm: 0.04
|
|
| 704 | - |
Brain
(34200797)
| - |
Deep-Palm: 0.83
|
|
| 711 | - | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.