Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DC16 | Ergic1 | Endoplasmic reticulum-Golgi intermediate compartment protein … | Mus musculus (Mouse) | 290 aa |
Protein Details: Q9DC16 (Ergic1)
Protein Information
| Accession | Q9DC16 |
|---|---|
| Protein Names | Endoplasmic reticulum-Golgi intermediate compartment protein 1 (ER-Golgi intermediate compartment 32 kDa protein) (ERGIC-32) |
| Gene Symbol | Ergic1 |
| Organism | Mus musculus (Mouse) |
| Length | 290 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29733200 31772009 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPFDFRRFDI11YRKVPKDLTQ21PTYTGAIISI31CCCLFILFLF41LSELTGFITT
51-10051EVVNELYVDD61PDKDSGGKID71VSLNISLPNL81HCELVGLDIQ91DEMGRHEVGH
101-150101IDNSMKIPLN111NGAGCRFEGQ121FSINKVPGNF131HVSTHSATAQ141PQNPDMTHTI
151-200151HKLSFGDTLQ161VQNVHGAFNA171LGGADRLTSN181PLASHDYILK191IVPTVYEDKS
201-250201GKQRYSYQYT211VANKEYVAYS221HTGRIIPAIW231FRYDLSPITV241KYTERRQPLY
251-290251RFITTICAII261GGTFTVAGIL271DSCIFTASEA281WKKIQLGKIH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 31 | Endoplasmic reticulum vesicle transporter, N-terminal Endoplasmic reticulum vesicle transporter | - | - |
Deep-Palm: 0.40
|
|
| 32 | Endoplasmic reticulum vesicle transporter, N-terminal Endoplasmic reticulum vesicle transporter | - | - |
Deep-Palm: 0.43
|
|
| 33 | Endoplasmic reticulum vesicle transporter, N-terminal Endoplasmic reticulum vesicle transporter | - | - |
Deep-Palm: 0.43
|
|
| 82 | - | - | - |
Deep-Palm: 0.88
|
|
| 115 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.30
|
|
| 257 | - | - | - |
Deep-Palm: 0.66
|
|
| 273 | - | - | - |
Deep-Palm: 0.75
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
5
Liver
Specificity: 0.455
5/5 (100.0%)
1
Raw 264.7
Specificity: 0.091
1/1 (100.0%)
1
Brain
Specificity: 0.091
1/1 (100.0%)
1
NSC
Specificity: 0.091
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.273
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.