Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DC69 | Ndufa9 | NADH dehydrogenase [ubiquinone] 1 alpha … | Mus musculus (Mouse) | 377 aa |
Protein Details: Q9DC69 (Ndufa9)
Protein Information
| Accession | Q9DC69 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial (Complex I-39kD) (CI-39kD) (NADH-ubiquinone oxidoreductase 39 kDa subunit) |
| Gene Symbol | Ndufa9 |
| Organism | Mus musculus (Mouse) |
| Length | 377 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29575903 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAVRFRVV11RALPMSRPAI21TAAATSVFCG31SSHRQLHHAV41IPHGKGGRSS
51-10051VSGVVATVFG61ATGFLGRYVV71NHLGRMGSQV81IIPYRCDVYD91IMHLRLMGDL
101-150101GQLTFLEWDA111RDKDSIRKAV121QHSNVVINLI131GREWETRNFD141FEDVFVNIPR
151-200151AIAQASKEAG161VERFIHVSHL171NASMKSSSKS181LRSKAVGEKE191VRSVFPEAII
201-250201IRPSDIFGRE211DRFLNHFANY221RWFLAVPLVS231LGFKTVKQPV241YVADVSKGIV
251-300251NATKDPDAVG261KTFAFTGPNR271YLLFHLVKYI281FGMTHRTFIP291YPLPLFVYSW
301-350301IGKLFGLSPF311EPWTTKDKVE321RIHISDVMPT331DLPGLEDLGV341QPTPLELKSI
351-377351EVLRRHRTYR361WLSSEIEETK371PAKTVNY
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 29 | - | - | - |
Deep-Palm: 0.55
|
|
| 86 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
|
Brain
(35358180)
|
Deep-Palm: 0.19
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.364
4
Brain
Specificity: 0.138
4/4 (100.0%)
3
Liver
Specificity: 0.103
3/3 (100.0%)
2
Raw 264.7
Specificity: 0.069
2/2 (100.0%)
2
Testis
Specificity: 0.069
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.621
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.