Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DCJ5 | Ndufa8 | NADH dehydrogenase [ubiquinone] 1 alpha … | Mus musculus (Mouse) | 172 aa |
Protein Details: Q9DCJ5 (Ndufa8)
Protein Information
| Accession | Q9DCJ5 |
|---|---|
| Protein Names | NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 (Complex I-19kD) (CI-19kD) (Complex I-PGIV) (CI-PGIV) (NADH-ubiquinone oxidoreductase 19 kDa subunit) |
| Gene Symbol | Ndufa8 |
| Organism | Mus musculus (Mouse) |
| Length | 172 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 31311849 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPGIVELPTL11EELKVEEVKV21SSAVLKAAAH31HYGAQCDKTN41KEFMLCRWEE
51-10051KDPRRCLKEG61KLVNGCALNF71FRQIKSHCAE81PFTEYWTCLD91YSNMQLFRHC
101-150101RQQQAKFDQC111VLDKLGWVRP121DLGQLSKVTK131VKTDRPLPEN141PYHSRARPEP
151-172151NPVIEGDLKP161AKHGTRFFFW171TV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 36 | NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8 Coiled coil-helix-coiled coil-helix (CHCH) domain profile. |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.81
|
|
| 46 | NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 8 Coiled coil-helix-coiled coil-helix (CHCH) domain profile. | - | - |
Deep-Palm: 0.78
|
|
| 56 | - | - | - |
Deep-Palm: 0.90
|
|
| 66 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.96
Deep-Palm: 0.96
|
| 78 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.17
|
|
| 88 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.06
|
|
| 100 | - | - | - |
Deep-Palm: 0.07
|
|
| 110 | - |
MLE
(39008777)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.91
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Liver
Specificity: 0.102
5/5 (100.0%)
4
Brain
Specificity: 0.082
4/4 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.950
38
Brain tissue (Mass)
Specificity: 0.776
38/56 (67.9%)
2
Liver tissue (Mass)
Specificity: 0.041
2/8 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.