Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DCK3 | Tspan4 | Tetraspanin-4 (Tspan-4) (Transmembrane 4 superfamily … | Mus musculus (Mouse) | 238 aa |
Protein Details: Q9DCK3 (Tspan4)
Protein Information
| Accession | Q9DCK3 |
|---|---|
| Protein Names | Tetraspanin-4 (Tspan-4) (Transmembrane 4 superfamily member 7) |
| Gene Symbol | Tspan4 |
| Organism | Mus musculus (Mouse) |
| Length | 238 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MARGCLQGVK11YLMFAFNLLF21WLGGCGVLGV31GIWLAATQGN41FATLSSSFPS
51-10051LSAANLLIVT61GTFVMAIGFV71GCIGALKENK81CLLLTFFVLL91LLVFLLEATI
101-150101AVLFFAYSDK111IDSYAQQDLK121KGLHLYGTQG131NVGLTNAWSI141IQTDFRCCGV
151-200151SNYTDWFEVY161NATRVPDSCC171LEFSDSCGLH181EPGTWWKSPC191YETVKAWLQE
201-238201NLLAVGIFGL211CTALVQILGL221TFAMTMYCQV231VKADTYCA
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 5 | Prokaryotic membrane lipoprotein lipid attachment site profile. | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.03
|
|
| 25 | Prokaryotic membrane lipoprotein lipid attachment site profile. Tetraspanin/Peripherin | - | - |
Deep-Palm: 0.43
|
|
| 72 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.98
|
|
| 81 | - | - | - |
Deep-Palm: 0.98
|
|
| 147 | - | - | - |
Deep-Palm: 0.65
|
|
| 148 | - | - | - |
Deep-Palm: 0.64
|
|
| 169 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family |
Liver
(28526873)
Forebrain
(28680068)
| - |
Deep-Palm: 0.28
|
| 170 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family |
Liver
(28526873)
| - |
Deep-Palm: 0.19
|
| 177 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family |
Liver
(28526873)
| - |
Deep-Palm: 0.07
|
| 190 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family |
Liver
(28526873)
| - |
Deep-Palm: 0.87
|
| 211 | - | - | - |
Deep-Palm: 0.86
|
|
| 228 | - | - | - |
Deep-Palm: 0.02
|
|
| 237 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Liver
Specificity: 1.000
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.