Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DCN1 | Nudt12 | NAD-capped RNA hydrolase NUDT12 (DeNADding … | Mus musculus (Mouse) | 462 aa |
Protein Details: Q9DCN1 (Nudt12)
Protein Information
| Accession | Q9DCN1 |
|---|---|
| Protein Names | NAD-capped RNA hydrolase NUDT12 (DeNADding enzyme NUDT12) (EC 3.6.1.-) (NADH pyrophosphatase NUDT12) (EC 3.6.1.22) (Nucleoside diphosphate-linked moiety X motif 12) (Nudix motif 12) |
| Gene Symbol | Nudt12 |
| Organism | Mus musculus (Mouse) |
| Length | 462 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSVKRNPKK11EMISELHSSA21AEGNVAKLAG31ILSHSPSLLN41ETSENGWTAL
51-10051MYAARNGHPD61VVQFLLEKGC71DRSLVNKARQ81TALDIAAFWG91YRHIANLLAN
101-150101AKGGKKPWFL111TNEVDECENY121FSRTLLDRRS131DKRNNSDWLQ141AKESHPTTVY
151-200151LLFSDLNPLV161TLGGNKESSQ171QPEVRLCQLN181YPDVKGYLAQ191PEKITLVFLG
201-250201VELEMRKGSP211AQAGGVPEEE221EDGLVAWFAL231GIEPGAAEEF241KQRHENCYFL
251-300251HPPMPALLQL261KEKEAGVVAQ271ARSVLAWHSR281YKFCPTCGSA291TKIEEGGYKR
301-350301VCVRETCPSL311QGVHNTSYPR321VDPVVIMQVI331HPDGTKCLLG341RQKRFPPGMF
351-400351TCLAGFIEPG361ETIEDAVRRE371VEEESGVKVG381HVQYVSCQPW391PMPSSLMIGC
401-450401LAVAVSTEIK411VDKNEIEDAR421WFTREQVVDV431LTKGKQQAFF441VPPSRAIAHQ
451-462451LIKHWVGMNP461NL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 70 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.92
|
|
| 117 | - | - | - |
Deep-Palm: 0.81
|
|
| 177 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
| - |
Deep-Palm: 0.91
|
| 247 | - | - | - |
Deep-Palm: 0.85
|
|
| 284 | - | - | - |
Deep-Palm: 0.44
|
|
| 287 | - | - | - |
Deep-Palm: 0.27
|
|
| 302 | - | - | - |
Deep-Palm: 0.60
|
|
| 307 | - | - | - |
Deep-Palm: 0.71
|
|
| 337 | - | - | - |
Deep-Palm: 0.84
|
|
| 352 | - | - | - |
Deep-Palm: 0.95
|
|
| 387 | - | - | - |
Deep-Palm: 0.53
|
|
| 400 | - | - | - |
Deep-Palm: 0.60
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Liver
Specificity: 1.000
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.