Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9DCS1 | Tmem176a | Transmembrane protein 176A (Gene signature … | Mus musculus (Mouse) | 244 aa |
Protein Details: Q9DCS1 (Tmem176a)
Protein Information
| Accession | Q9DCS1 |
|---|---|
| Protein Names | Transmembrane protein 176A (Gene signature 188) (Kidney-expressed gene 2 protein) |
| Gene Symbol | Tmem176a |
| Organism | Mus musculus (Mouse) |
| Length | 244 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29217618 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSTDMETAVV11GKVDPEAPQP21THIDVHIHQE31SALAKLLLAG41CSLLRIPASA
51-10051STQSQGSSRV61LVASWVVQTV71LGALSVVLGG81TLYIGHYLAM91YSEGAPFWTG
101-150101IVAMLAGAVA111FLHKKRGGTC121WALMRTLLVL131ASFCTAVAAI141VIGSRELNFY
151-200151WYFLGDDVCQ161RDSSYGWSTM171PRTTPVPEEA181DRIALCIYYT191SMLKTLLMSL
201-244201QAMLLGIWVL211LLLASLTPVC221VYIWKRFFTK231AETEEKKLLG241AAVI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 41 | SWISSPALM DBPTM CYSMODDB | Transmembrane protein 176A/B |
Liver
(28526873)
| - |
GPS-Palm: 0.96
Deep-Palm: 0.97
|
| 120 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.97
|
|
| 134 | - | - | - |
Deep-Palm: 0.93
|
|
| 159 | - | - | - |
Deep-Palm: 0.14
|
|
| 186 | - | - | - |
Deep-Palm: 0.77
|
|
| 220 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
Liver
Specificity: 0.800
4/4 (100.0%)
1
Raw 264.7
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.