Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9EQ20 | Aldh6a1 | Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (MMSDH) … | Mus musculus (Mouse) | 535 aa |
Protein Details: Q9EQ20 (Aldh6a1)
Protein Information
| Accession | Q9EQ20 |
|---|---|
| Protein Names | Methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial (MMSDH) (EC 1.2.1.27) (Aldehyde dehydrogenase family 6 member A1) (Malonate-semialdehyde dehydrogenase [acylating]) |
| Gene Symbol | Aldh6a1 |
| Organism | Mus musculus (Mouse) |
| Length | 535 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAVAAAAA11MRSRILQVSS21KVNATWYPAS31SFSSSSVPTV41KLFIDGKFVE
51-10051SKSDKWIDIH61NPATNEVVGR71VPQSTKAEMD81AAVESCKRAF91PAWADTSILS
101-150101RQQVLLRYQQ111LIKENLKEIA121RLITLEQGKT131LADAEGDVFR141GLQVVEHACS
151-200151VTSLMLGETM161PSITKDMDLY171SYRLPLGVCA181GIAPFNFPAM191IPLWMFPMAM
201-250201VCGNTFLMKP211SERVPGATML221LAKLLQDSGA231PDGTLNIIHG241QHDAVNFICD
251-300251HPDIKAISFV261GSNQAGEYIF271ERGSRNGKRV281QANMGAKNHG291VVMPDANKEN
301-350301TLNQLVGAAF311GAAGQRCMAL321STAILVGEAK331KWLPELVDRA341KNLRVNAGDQ
351-400351PGADLGPLIT361PQAKERVCNL371IDSGTKEGAS381ILLDGRRIKV391KGYENGNFVG
401-450401PTIISNVKPS411MTCYKEEIFG421PVLVVLETET431LDEAIKIVND441NPYGNGTAIF
451-500451TTNGATARKY461AHMVDVGQVG471VNVPIPVPLP481MFSFTGSRSS491FRGDTNFYGK
501-535501QGIQFYTQLK511TITSQWKEED521ATLSSPAVVM531PTMGR
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 86 | SWISSPALM DBPTM CYSMODDB | Aldehyde dehydrogenase family |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.95
|
| 149 | - | - |
Liver
(34884899)
Brain
(35358180)
|
Deep-Palm: 0.92
|
|
| 179 | - | - | - |
Deep-Palm: 0.84
|
|
| 202 | - | - | - |
Deep-Palm: 0.60
|
|
| 249 | Aldehyde dehydrogenase family |
Brain
(34200797)
|
Liver
(37925639)
Brain
(35358180)
|
Deep-Palm: 0.12
|
|
| 317 | SWISSPALM DBPTM CYSMODDB | Aldehyde dehydrogenase family | - | - |
Deep-Palm: 0.97
|
| 368 | SWISSPALM DBPTM CYSMODDB | Aldehyde dehydrogenase family |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.98
|
| 413 | - | - | - |
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.158
6/6 (100.0%)
5
Brain
Specificity: 0.132
5/5 (100.0%)
2
Testis
Specificity: 0.053
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.840
21
Brain tissue (Mass)
Specificity: 0.553
21/56 (37.5%)
4
Liver tissue (Mass)
Specificity: 0.105
4/8 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.