Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9ERD7 | Tubb3 | Tubulin beta-3 chain | Mus musculus (Mouse) | 450 aa |
Protein Details: Q9ERD7 (Tubb3)
Protein Information
| Accession | Q9ERD7 |
|---|---|
| Protein Names | Tubulin beta-3 chain |
| Gene Symbol | Tubb3 |
| Organism | Mus musculus (Mouse) |
| Length | 450 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28680068 29660268 29733200 34200797 35358180 35477839 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
8
Brain tissue
Specificity: 0.500
8/12 (66.7%)
6
Liver tissue
Specificity: 0.375
6/19 (31.6%)
2
Testis
Specificity: 0.125
2/2 (100.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MREIVHIQAG11QCGNQIGAKF21WEVISDEHGI31DPSGNYVGDS41DLQLERISVY
51-10051YNEASSHKYV61PRAILVDLEP71GTMDSVRSGA81FGHLFRPDNF91IFGQSGAGNN
101-150101WAKGHYTEGA111ELVDSVLDVV121RKECENCDCL131QGFQLTHSLG141GGTGSGMGTL
151-200151LISKVREEYP161DRIMNTFSVV171PSPKVSDTVV181EPYNATLSIH191QLVENTDETY
201-250201CIDNEALYDI211CFRTLKLATP221TYGDLNHLVS231ATMSGVTTSL241RFPGQLNADL
251-300251RKLAVNMVPF261PRLHFFMPGF271APLTARGSQQ281YRALTVPELT291QQMFDAKNMM
301-350301AACDPRHGRY311LTVATVFRGR321MSMKEVDEQM331LAIQSKNSSY341FVEWIPNNVK
351-400351VAVCDIPPRG361LKMSSTFIGN371STAIQELFKR381ISEQFTAMFR391RKAFLHWYTG
401-450401EGMDEMEFTE411AESNMNDLVS421EYQQYQDATA431EEEGEMYEDD441DEESEAQGPK
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 12 | Experimental | Tubulin/FtsZ family GTPase domain | 39008777 |
| 124 | Experimental CYSMODDB SWISSPALM DBPTM | Tubulin/FtsZ family GTPase domain | 28680068 |
| 127 | Experimental CYSMODDB SWISSPALM DBPTM | Tubulin/FtsZ family GTPase domain | 28680068 |
| 129 | Experimental | Tubulin/FtsZ family GTPase domain | 28680068 |
| 303 | Experimental Prediction (High) | Tubulin C-terminal domain | 34200797 |
| 354 | Experimental Prediction (High) | Tubulin C-terminal domain | 39008777 |