Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q9ERI6 Rdh14 Retinol dehydrogenase 14 (EC 1.1.1.300) … Mus musculus (Mouse) 334 aa

Protein Details: Q9ERI6 (Rdh14)

Protein Information
AccessionQ9ERI6
Protein NamesRetinol dehydrogenase 14 (EC 1.1.1.300) (Alcohol dehydrogenase PAN2)
Gene SymbolRdh14
OrganismMus musculus (Mouse)
Length334 aa
IsoformsNo isoforms
Related PMIDs 28526873 34884899 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass)
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVASVAAAL11LAALGGALWL21AARRFSGPRN31QRQQGGGDPG41LMHGKTVLIT
51-10051GANSGLGRAT61AAELLRLGAR71VIMGCRDRAR81AEEAAGQLRQ91ELCQAGGAGP
101-150101DGTDGQLVVK111ELDLASLRSV121RAFCQELLQE131EPRLDVLINN141AGVFHCPYTK
151-200151TEDGFEMQFG161VNHLGHFLLT171NLLLGLLKSS181APSRIVVVSS191KLYKYGEINF
201-250201EDLNSEQSYN211KSFCYSRSKL221ANILFTRELA231RRLEGTNVTV241NVLHPGIVRT
251-300251NLGRHIHIPL261LARPLFNLVS271WAFFKTPLEG281AQTSIYLACS291PDVEGVSGRY
301-334301FGDCKEEELL311PKAMDESVAR321KLWDISEVMV331GILK
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
75 - - -
GPS-Palm: 0.96
Deep-Palm: 0.98
93 - - -
Deep-Palm: 0.98
124 SWISSPALM DBPTM CYSMODDB -
Liver (28526873)
Brain (35358180)
GPS-Palm: 0.90
Deep-Palm: 0.98
146 - -
Brain (35358180)
Deep-Palm: 0.94
214 - - -
Deep-Palm: 0.95
289 - -
Brain (35358180)
Deep-Palm: 0.94
304 - - -
Deep-Palm: 0.96
Score Interpretation:
GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 0.154
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
11
Brain tissue (Mass)
Specificity: 0.846
11/56 (19.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine