Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9ET30 | Tm9sf3 | Transmembrane 9 superfamily member 3 | Mus musculus (Mouse) | 587 aa |
Protein Details: Q9ET30 (Tm9sf3)
Protein Information
| Accession | Q9ET30 |
|---|---|
| Protein Names | Transmembrane 9 superfamily member 3 |
| Gene Symbol | Tm9sf3 |
| Organism | Mus musculus (Mouse) |
| Length | 587 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34884899 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MRPLPGAPGV11AAAAALLLLL21LPRARSDEHE31HTYQDKEEVV41LWMNTVGPYH
51-10051NRQETYKYFS61LPFCVGSKKS71ISHYHETLGE81ALQGVELEFS91GLDIKFKDDV
101-150101MPGTYCEIDL111DKEKRDAFVY121AIKNHYWYQM131YIDDLPIWGI141VGEADENGED
151-200151YYLWTYKKLE161IGFNGNRIVD171VNLTSEGKVK181LVPNTKIQMS191YSVKWKKSDV
201-250201KFEDRFDKYL211DPSFFQHRIH221WFSIFNSFMM231VIFLVGLVSM241ILMRTLRKDY
251-300251ARYSKEEEMD261DMDRDLGDEY271GWKQVHGDVF281RPSSHPLIFS291SLIGSGCQIF
301-350301AVSLIVIIVA311MIEDLYTERG321SMLSTAIFVY331AATSPVNGYF341GGSLYARQGG
351-400351RRWIKQMFIG361AFLIPAMVCG371TAFFINFIAI381YYHASRAIPF391GTMVAVCCIC
401-450401FFVILPLNLV411GTILGRNLSG421QPNFPCRVNA431VPRPIPEKKW441FMEPAVIVCL
451-500451GGILPFGSIF461IEMYFIFTSF471WAYKIYYVYG481FMMLVLVILC491IVTVCVTIVC
501-550501TYFLLNAEDY511RWQWTSFLSA521ASTAIYVYMY531SFYYYFFKTK541MYGLFQTSFY
551-587551FGYMAVFSTA561LGIMCGAIGY571MGTSAFVRKI581YTNVKID
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 64 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
brain
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.80
Deep-Palm: 0.50
|
| 106 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.65
|
|
| 297 | - | - | - |
GPS-Palm: 0.68
Deep-Palm: 0.39
|
|
| 369 | - | - | - |
Deep-Palm: 0.05
|
|
| 397 | - | - | - |
Deep-Palm: 0.25
|
|
| 398 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.16
|
|
| 400 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.61
|
|
| 426 | SWISSPALM DBPTM CYSMODDB | Endomembrane protein 70 |
Liver
(28526873)
| - |
GPS-Palm: 0.73
Deep-Palm: 0.84
|
| 449 | - | - | - |
Deep-Palm: 0.67
|
|
| 490 | - | - | - |
Deep-Palm: 0.03
|
|
| 495 | - | - | - |
Deep-Palm: 0.07
|
|
| 500 | - | - | - |
Deep-Palm: 0.05
|
|
| 565 | - | - | - |
Deep-Palm: 0.45
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
5
Liver
Specificity: 0.294
5/5 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
12
Brain tissue (Mass)
Specificity: 0.706
12/56 (21.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.