Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9GZM8 | NDEL1 | Nuclear distribution protein nudE-like 1 … | Homo sapiens (Human) | 345 aa |
Protein Details: Q9GZM8 (NDEL1)
Protein Information
| Accession | Q9GZM8 |
|---|---|
| Protein Names | Nuclear distribution protein nudE-like 1 (Protein Nudel) (Mitosin-associated protein 1) |
| Gene Symbol | NDEL1 |
| Organism | Homo sapiens (Human) |
| Length | 345 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDGEDIPDFS11SLKEETAYWK21ELSLKYKQSF31QEARDELVEF41QEGSRELEAE
51-10051LEAQLVQAEQ61RNRDLQADNQ71RLKYEVEALK81EKLEHQYAQS91YKQVSVLEDD
101-150101LSQTRAIKEQ111LHKYVRELEQ121ANDDLERAKR131ATIVSLEDFE141QRLNQAIERN
151-200151AFLESELDEK161ESLLVSVQRL171KDEARDLRQE181LAVRERQQEV191TRKSAPSSPT
201-250201LDCEKMDSAV211QASLSLPATP221VGKGTENTFP231SPKAIPNGFG241TSPLTPSARI
251-300251SALNIVGDLL261RKVGALESKL271AACRNFAKDQ281ASRKSYISGN291VNCGVLNGNG
301-345301TKFSRSGHTS311FFDKGAVNGF321DPAPPPPGLG331SSRPSSAPGM341LPLSV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 203 | - | - | - |
Deep-Palm: 0.94
|
|
| 273 | DBPTM SWISSPALM | NUDE protein C-terminal conserved region | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.98
|
| 293 | - | - | - |
Deep-Palm: 0.60
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 208 | S → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 330 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |