Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9GZU7-2 | CTDSP1 | Isoform 2 of Carboxy-terminal domain … | Homo sapiens (Human) | 260 aa |
Protein Details: Q9GZU7-2 (CTDSP1)
Protein Information
| Accession | Q9GZU7-2 |
|---|---|
| Protein Names | Isoform 2 of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 |
| Gene Symbol | CTDSP1 |
| Organism | Homo sapiens (Human) |
| Length | 260 aa |
| Isoforms |
|
| Related PMIDs | 19801377 31251020 32651440 33636221 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.905
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
38
LNCaP cells
Specificity: 0.905
38/46 (82.6%)
2
DU145 cells
Specificity: 0.048
2/2 (100.0%)
1
Jurkat T cells
Specificity: 0.024
1/25 (4.0%)
1
Liver membrane
Specificity: 0.024
1/1 (100.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDSSAVITQI11SKEEARGPLR21GKGDQKSAAS31QKPRSRGILH41SLFCCVCRDD
51-10051GEALPAHSGA61PLLVEENGAI71PKTPVQYLLP81EAKAQDSDKI91CVVIDLDETL
101-150101VHSSFKPVNN111ADFIIPVEID121GVVHQVYVLK131RPHVDEFLQR141MGELFECVLF
151-200151TASLAKYADP161VADLLDKWGA171FRARLFRESC181VFHRGNYVKD191LSRLGRDLRR
201-250201VLILDNSPAS211YVFHPDNAVP221VASWFDNMSD231TELHDLLPFF241EQLSRVDDVY
251-260251SVLRQPRPGS
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 44 | Prediction (High) | - | - |
| 45 | Prediction (High) | - | - |
| 147 | Prediction (High) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 181 | C → S | 0.003559 | SNP | Missense Mutation | KIRP |
| 246 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |