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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q9H0U4 RAB1B Ras-related protein Rab-1B (EC 3.6.5.2) Homo sapiens (Human) 201 aa

Protein Details: Q9H0U4 (RAB1B)

Protein Information
Accession Q9H0U4
Protein Names Ras-related protein Rab-1B (EC 3.6.5.2)
Gene Symbol RAB1B
Organism Homo sapiens (Human)
Length 201 aa
Isoforms No isoforms
Related PMIDs 19137006 19801377 21076176 22496122 26876311 29733200 31251020 37611173
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.490
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
25
LNCaP cells
Specificity: 0.490
25/46 (54.3%)
12
Jurkat T cells
Specificity: 0.235
12/25 (48.0%)
10
HAP1 cells
Specificity: 0.196
10/10 (100.0%)
2
DU145 cells
Specificity: 0.039
2/2 (100.0%)
1
Endothelial cells
Specificity: 0.020
1/2 (50.0%)
1
Prefrontal cortex
Specificity: 0.020
1/1 (100.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MNPEYDYLFK11LLLIGDSGVG21KSCLLLRFAD31DTYTESYIST41IGVDFKIRTI
51-10051ELDGKTIKLQ61IWDTAGQERF71RTITSSYYRG81AHGIIVVYDV91TDQESYANVK
101-150101QWLQEIDRYA111SENVNKLLVG121NKSDLTTKKV131VDNTTAKEFA141DSLGIPFLET
151-200151SAKNATNVEQ161AFMTMAAEIK171KRMGPGAASG181GERPNLKIDS191TPVKPAGGGC
201-201201C
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
23 CYSMODDB SWISSPALM DBPTM Prediction (Medium) Ras family -
200 Experimental Prediction (High) - 37611173
201 Experimental Prediction (High) - 37611173
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
88 Y → C 0.002141 SNP Missense Mutation SKCM
200 C → Y 0.002288 SNP Missense Mutation STAD
200 C → S 0.002033 SNP Missense Mutation LUSC