Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9H3Z4-2 | DNAJC5 | DnaJ homolog subfamily C member … | Homo sapiens (Human) | 167 aa |
Protein Details: Q9H3Z4-2 (DNAJC5)
Protein Information
| Accession | Q9H3Z4-2 |
|---|---|
| Protein Names | DnaJ homolog subfamily C member 5 (Ceroid-lipofuscinosis neuronal protein 4) (Cysteine string protein) (CSP) |
| Gene Symbol | DNAJC5 |
| Organism | Homo sapiens (Human) |
| Length | 167 aa |
| Isoforms | |
| Related PMIDs | 31251020 32651440 32944167 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MADQRQRSLS11TSGESLYHVL21GLDKNATSDD31IKKSYRKLAL41KYHPDKNPDN
51-10051PEAADKFKEI61NNAHAILTDA71TKRNIYDKYG81SLGLYVAEQF91GEENVNTYFV
101-150101LSSWWAKALF111VFCGLLTCCY121CCCCLCCCFN131CCCGKCKPKA141PEGEETEFYV
151-167151SPEDLEAQLQ161SDERGGH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 113 | - | - | - |
Deep-Palm: 0.30
|
|
| 118 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.26
|
|
| 119 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.30
|
|
| 121 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.27
|
|
| 122 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.23
|
|
| 123 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.21
|
|
| 124 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.15
|
|
| 126 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.24
|
|
| 127 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.34
|
|
| 128 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.44
|
|
| 131 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.38
|
|
| 132 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.31
|
|
| 133 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.23
|
|
| 136 | - | - | - |
Deep-Palm: 0.59
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.364
4
PC3
Specificity: 0.364
4/4 (100.0%)
4
cerebral cortex
Specificity: 0.364
4/4 (100.0%)
2
LNCaP
Specificity: 0.182
2/2 (100.0%)
1
Jurkat T cell
Specificity: 0.091
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 133 | C → C | 0.001887 | SNP | Silent | UCEC |