Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q9H6S0 YTHDC2 3'-5' RNA helicase YTHDC2 (EC … Homo sapiens (Human) 1430 aa

Protein Details: Q9H6S0 (YTHDC2)

Protein Information
Accession Q9H6S0
Protein Names 3'-5' RNA helicase YTHDC2 (EC 3.6.4.13) (YTH domain-containing protein 2) (hYTHDC2)
Gene Symbol YTHDC2
Organism Homo sapiens (Human)
Length 1430 aa
Isoforms No isoforms
Related PMIDs 19801377
Database Sources No database sources
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MSRPSSVSPR11QPAPGGGGGG21GPSPCGPGGG31GRAKGLKDIR41IDEEVKIAVN
51-10051IALERFRYGD61QREMEFPSSL71TSTERAFIHR81LSQSLGLVSK91SKGKGANRYL
101-150101TVKKKDGSET111AHAMMTCNLT121HNTKHAVRSL131IQRFPVTNKE141RTELLPKTER
151-200151GNVFAVEAEN161REMSKTSGRL171NNGIPQIPVK181RGESEFDSFR191QSLPVFEKQE
201-250201EIVKIIKENK211VVLIVGETGS221GKTTQIPQFL231LDDCFKNGIP241CRIFCTQPRR
251-300251LAAIAVAERV261AAERRERIGQ271TIGYQIRLES281RVSPKTLLTF291CTNGVLLRTL
301-350301MAGDSTLSTV311THVIVDEVHE321RDRFSDFLLT331KLRDLLQKHP341TLKLILSSAA
351-400351LDVNLFIRYF361GSCPVIYIQG371RPFEVKEMFL381EDILRTTGYT391NKEMLKYKKE
401-450401KQQEEKQQTT411LTEWYSAQEN421SFKPESQRQR431TVLNVTDEYD441LLDDGGDAVF
451-500451SQLTEKDVNC461LEPWLIKEMD471ACLSDIWLHK481DIDAFAQVFH491LILTENVSVD
501-550501YRHSETSATA511LMVAAGRGFA521SQVEQLISMG531ANVHSKASNG541WMALDWAKHF
551-600551GQTEIVDLLE561SYSATLEFGN571LDESSLVQTN581GSDLSAEDRE591LLKAYHHSFD
601-650601DEKVDLDLIM611HLLYNICHSC621DAGAVLIFLP631GYDEIVGLRD641RILFDDKRFA
651-700651DSTHRYQVFM661LHSNMQTSDQ671KKVLKNPPAG681VRKIILSTNI691AETSITVNDV
701-750701VFVIDSGKVK711EKSFDALNFV721TMLKMVWISK731ASAIQRKGRA741GRCRPGICFR
751-800751LFSRLRFQNM761LEFQTPELLR771MPLQELCLHT781KLLAPVNCPI791ADFLMKAPEP
801-850801PPALIVRNAV811QMLKTIDAMD821TWEDLTELGY831HLADLPVEPH841LGKMVLCAVV
851-900851LKCLDPILTI861ACTLAYRDPF871VLPTQASQKR881AAMLCRKRFT891AGAFSDHMAL
901-950901LRAFQAWQKA911RSDGWERAFC921EKNFLSQATM931EIIIGMRTQL941LGQLRASGFV
951-1000951RARGGGDIRD961VNTNSENWAV971VKAALVAGMY981PNLVHVDREN991LVLTGPKEKK
1001-10501001VRFHPASVLS1011QPQYKKIPPA1021NGQAAAIKAL1031PTDWLIYDEM1041TRAHRIANIR
1051-11001051CCSAVTPVTI1061LVFCGPARLA1071SNALQEPSSF1081RVDGIPNDSS1091DSEMEDKTTA
1101-11501101NLAALKLDEW1111LHFTLEPEAA1121SLLLQLRQKW1131HSLFLRRMRA1141PSKPWSQVDE
1151-12001151ATIRAIIAVL1161STEEQSAGLQ1171QPSGIGQRPR1181PMSSEELPLA1191SSWRSNNSRK
1201-12501201SSADTEFSDE1211CTTAERVLMK1221SPSPALHPPQ1231KYKDRGILHP1241KRGTEDRSDQ
1251-13001251SSLKSTDSSS1261YPSPCASPSP1271PSSGKGSKSP1281SPRPNMPVRY1291FIMKSSNLRN
1301-13501301LEISQQKGIW1311STTPSNERKL1321NRAFWESSIV1331YLVFSVQGSG1341HFQGFSRMSS
1351-14001351EIGREKSQDW1361GSAGLGGVFK1371VEWIRKESLP1381FQFAHHLLNP1391WNDNKKVQIS
1401-14301401RDGQELEPLV1411GEQLLQLWER1421LPLGEKNTTD
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
25 Experimental Prediction (Medium) - 19801377
234 Prediction (Medium) - -
241 Prediction (Medium) - -
245 Prediction (High) - -
291 Prediction (High) - -
363 Prediction (Medium) - -
743 Prediction (Medium) - -
748 Prediction (High) - -
777 Prediction (Medium) - -
847 Prediction (Low) - -
862 Prediction (Low) - -
885 Prediction (Medium) - -
1051 Prediction (Low) - -
1052 Prediction (High) - -
1064 Prediction (Medium) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
25 C → R 0.002747 SNP Missense Mutation LIHC
141 R → C 0.003460 SNP Missense Mutation CESC
188 S → C 0.003460 SNP Missense Mutation CESC
241 C → G 0.002141 SNP Missense Mutation SKCM
298 R → C 0.002506 SNP Missense Mutation COAD
394 M → Cfs*2 0.002141 DEL Frame Shift Del SKCM
472 C → C 0.002506 SNP Silent COAD
652 S → C 0.001887 SNP Missense Mutation UCEC
750 R → C 0.002141 SNP Missense Mutation SKCM
862 C → Y 0.001887 SNP Missense Mutation UCEC
1052 C → G 0.001014 SNP Missense Mutation BRCA
1420 R → C 0.007299 SNP Missense Mutation READ