Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9HBI1-3 | PARVB | Beta-parvin (Affixin) | Homo sapiens (Human) | 327 aa |
Protein Details: Q9HBI1-3 (PARVB)
Protein Information
| Accession | Q9HBI1-3 |
|---|---|
| Protein Names | Beta-parvin (Affixin) |
| Gene Symbol | PARVB |
| Organism | Homo sapiens (Human) |
| Length | 327 aa |
| Isoforms | |
| Related PMIDs | 33636221 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSDLQEEGKN11AINSPMSPAL21VDVHPEDTQL31EENEERTMID41PTSKEDPKFK
51-10051ELVKVLLDWI61NDVLVEERII71VKQLEEDLYD81GQVLQKLLEK91LAGCKLNVAE
101-150101VTQSEIGQKQ111KLQTVLEAVH121DLLRPRGWAL131RWSVDSIHGK141NLVAILHLLV
151-200151SLAMHFRAPI161RLPEHVTVQV171VVVRKREGLL181HSSHISEELT191TTTEMMMGRF
201-250201ERDAFDTLFD211HAPDKLSVVK221KSLITFVNKH231LNKLNLEVTE241LETQFADGVY
251-300251LVLLMGLLED261YFVPLHHFYL271TPESFDQKVH281NVSFAFELML291DGGLKKPKAR
301-327301PEDVVNLDLK311STLRVLYNLF321TKYKNVE
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 94 | - | - | - |
GPS-Palm: 0.90
|
|
| 131 | - | - | - |
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
heart
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 73 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 96 | W → C | 0.002506 | SNP | Missense Mutation | COAD |
| 337 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| ? | ? → ? | 0.003460 | DEL | Frame Shift Del | CESC |