Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9HCP0-2 | CSNK1G1 | Casein kinase I isoform gamma-1 … | Homo sapiens (Human) | 393 aa |
Protein Details: Q9HCP0-2 (CSNK1G1)
Protein Information
| Accession | Q9HCP0-2 |
|---|---|
| Protein Names | Casein kinase I isoform gamma-1 (CKI-gamma 1) (EC 2.7.11.1) |
| Gene Symbol | CSNK1G1 |
| Organism | Homo sapiens (Human) |
| Length | 393 aa |
| Isoforms | |
| Related PMIDs | 31251020 32651440 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDHPSREKDE11RQRTTKPMAQ21RSAHCSRPSG31SSSSSGVLMV41GPNFRVGKKI
51-10051GCGNFGELRL61GKNLYTNEYV71AIKLEPIKSR81APQLHLEYRF91YKQLGSAGEG
101-150101LPQVYYFGPC111GKYNAMVLEL121LGPSLEDLFD131LCDRTFTLKT141VLMIAIQLLS
151-200151RMEYVHSKNL161IYRDVKPENF171LIGRQGNKKE181HVIHIIDFGL191AKEYIDPETK
201-250201KHIPYREHKS211LTGTARYMSI221NTHLGKEQSR231RDDLEALGHM241FMYFLRGSLP
251-300251WQGLKADTLK261ERYQKIGDTK271RNTPIEALCE281NFPEEMATYL291RYVRRLDFFE
301-350301KPDYEYLRTL311FTDLFEKKGY321TFDYAYDWVG331RPIPTPVGSV341HVDSGASAIT
351-393351RESHTHRDRP361SQQQPLRNQS371LRTVTAEHYD381VNNSAIWHRG391RGT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 25 | - | - | - |
Deep-Palm: 0.75
|
|
| 52 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.93
|
|
| 110 | - | - | - |
Deep-Palm: 0.96
|
|
| 132 | - | - | - |
Deep-Palm: 0.97
|
|
| 279 | - | - | - |
Deep-Palm: 0.76
|
|
| 406 | - | - | - |
Deep-Palm: 0.90
|
|
| 407 | - | - | - |
Deep-Palm: 0.90
|
|
| 408 | - | - | - |
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
LNCaP
Specificity: 0.667
2/2 (100.0%)
1
Jurkat T cell
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 194 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 420 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 420 | R → C | 0.006993 | SNP | Missense Mutation | LAML |