Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9JL56 | Gde1; Mir16 | Glycerophosphodiester phosphodiesterase 1 (Glycerophosphoinositol glycerophosphodiesterase … | Mus musculus (Mouse) | 331 aa |
Protein Details: Q9JL56 (Gde1)
Protein Information
| Accession | Q9JL56 |
|---|---|
| Protein Names | Glycerophosphodiester phosphodiesterase 1 (Glycerophosphoinositol glycerophosphodiesterase GDE1) (EC 3.1.4.44) (Lysophospholipase D GDE1) (EC 3.1.4.-) (Membrane-interacting protein of RGS16) |
| Gene Symbol | Gde1; Mir16 |
| Organism | Mus musculus (Mouse) |
| Length | 331 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 35477839 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
4
Brain tissue
Specificity: 0.667
4/12 (33.3%)
1
Liver tissue
Specificity: 0.167
1/19 (5.3%)
1
Testis
Specificity: 0.167
1/2 (50.0%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MWLWEDQGGL11LGPFSFVLVL21LLVVTRSPFN31ACVLTGSLYI41LLRFFSFEPV
51-10051PSRRALQVLK61PRDRVSAIAH71RGGSHDAPEN81TLAAIRQAAK91NGATGVELDI
101-150101EFTSDGVPVL111MHDNTVDRTT121DGSGRLCDLT131FEQVRKLNPA141ANHRLRNEFP
151-200151DERIPTLKEA161VTECLRHNLT171IFFDVKGHAD181MASAALKNIY191TEFPQLYNNS
201-250201MVCSFLPEVI211YKMRQTDQKV221ITALTHRPWS231LSHTGDGKPR241YSVFWKQSVF
251-300251VVLDILLDWS261MHNVLWYLCG271ISAFLMQKDF281VSPDYLKKWS291AKGIQVVSWT
301-331301VNTFDEKNYY311ESHLGSSYIT321DSMLEDCAPH331F
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 127 | Experimental CYSMODDB SWISSPALM DBPTM | Glycerophosphoryl diester phosphodiesterase family | 28526873 |
| 327 | Prediction (High) | - | - |