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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
Q9NPF0 CD320 CD320 antigen (8D6 antigen) (FDC-signaling … Homo sapiens (Human) 282 aa

Protein Details: Q9NPF0 (CD320)

Protein Information
AccessionQ9NPF0
Protein NamesCD320 antigen (8D6 antigen) (FDC-signaling molecule 8D6) (FDC-SM-8D6) (Transcobalamin receptor) (TCblR) (CD antigen CD320)
Gene SymbolCD320
OrganismHomo sapiens (Human)
Length282 aa
IsoformsNo isoforms
Related PMIDs No related PMIDs
Database SourcesSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MSGGWMAQVG11AWRTGALGLA21LLLLLGLGLG31LEAAASPLST41PTSAQAAGPS
51-10051SGSCPPTKFQ61CRTSGLCVPL71TWRCDRDLDC81SDGSDEEECR91IEPCTQKGQC
101-150101PPPPGLPCPC111TGVSDCSGGT121DKKLRNCSRL131ACLAGELRCT141LSDDCIPLTW
151-200151RCDGHPDCPD161SSDELGCGTN171EILPEGDATT181MGPPVTLESV191TSLRNATTMG
201-250201PPVTLESVPS211VGNATSSSAG221DQSGSPTAYG231VIAAAAVLSA241SLVTATLLLL
251-282251SWLRAQERLR261PLGLLVAMKE271SLLLSEQKTS281LP
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
54 - - -
Deep-Palm: 0.58
61 - - -
Deep-Palm: 0.44
67 - - -
GPS-Palm: 0.66
Deep-Palm: 0.46
74 - - -
Deep-Palm: 0.13
80 - - -
Deep-Palm: 0.09
89 - - -
Deep-Palm: 0.05
94 - - -
Deep-Palm: 0.05
100 -
HeLa (37611173)
-
Deep-Palm: 0.08
108 -
HeLa (37611173)
-
Deep-Palm: 0.20
110 - - -
Deep-Palm: 0.71
116 - - -
Deep-Palm: 0.77
127 - - -
GPS-Palm: 0.91
Deep-Palm: 0.96
132 - - -
GPS-Palm: 0.92
Deep-Palm: 0.90
139 - - -
Deep-Palm: 0.45
145 - - -
Deep-Palm: 0.30
152 - - -
Deep-Palm: 0.07
158 - - -
Deep-Palm: 0.05
167 - - -
Deep-Palm: 0.21
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
61 C → R 0.001887 SNP Missense Mutation UCEC
62 R → C 0.001887 SNP Missense Mutation UCEC
67 C → Y 0.002288 SNP Missense Mutation STAD
74 C → S 0.006993 SNP Missense Mutation LAML
100 C → R 0.001887 SNP Missense Mutation UCEC
151 R → C 0.002288 SNP Missense Mutation STAD
260 R → C 0.002288 SNP Missense Mutation STAD