Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9NPQ8 | RIC8A | Chaperone Ric-8A (Synembryn-A) | Homo sapiens (Human) | 531 aa |
Protein Details: Q9NPQ8 (RIC8A)
Protein Information
| Accession | Q9NPQ8 |
|---|---|
| Protein Names | Chaperone Ric-8A (Synembryn-A) |
| Gene Symbol | RIC8A |
| Organism | Homo sapiens (Human) |
| Length | 531 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEPRAVAEAV11ETGEEDVIME21ALRSYNQEHS31QSFTFDDAQQ41EDRKRLAELL
51-10051VSVLEQGLPP61SHRVIWLQSV71RILSRDRNCL81DPFTSRQSLQ91ALACYADISV
101-150101SEGSVPESAD111MDVVLESLKC121LCNLVLSSPV131AQMLAAEARL141VVKLTERVGL
151-200151YRERSFPHDV161QFFDLRLLFL171LTALRTDVRQ181QLFQELKGVR191LLTDTLELTL
201-250201GVTPEGNPPP211TLLPSQETER221AMEILKVLFN231ITLDSIKGEV241DEEDAALYRH
251-300251LGTLLRHCVM261IATAGDRTEE271FHGHAVNLLG281NLPLKCLDVL291LTLEPHGDST
301-350301EFMGVNMDVI311RALLIFLEKR321LHKTHRLKES331VAPVLSVLTE341CARMHRPARK
351-400351FLKAQVLPPL361RDVRTRPEVG371EMLRNKLVRL381MTHLDTDVKR391VAAEFLFVLC
401-450401SESVPRFIKY411TGYGNAAGLL421AARGLMAGGR431PEGQYSEDED441TDTDEYKEAK
451-500451ASINPVTGRV461EEKPPNPMEG471MTEEQKEHEA481MKLVTMFDKL491SRNRVIQPMG
501-531501MSPRGHLTSL511QDAMCETMEQ521QLSSDPDSDP531D
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 79 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.91
|
|
| 94 | - | - | - |
Deep-Palm: 0.95
|
|
| 120 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.70
Deep-Palm: 0.92
|
|
| 122 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.91
|
|
| 258 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.97
|
|
| 286 | - | - | - |
Deep-Palm: 0.96
|
|
| 341 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 400 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.88
|
|
| 515 | - | - | - |
Deep-Palm: 0.53
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 152 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 175 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 190 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 258 | C → Y | 0.001887 | SNP | Missense Mutation | UCEC |
| 311 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 311 | R → C | 0.002294 | SNP | Missense Mutation | OV |
| 515 | C → C | 0.002020 | SNP | Silent | PRAD |