Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9NQ66-2 | PLCB1 | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 (EC … | Homo sapiens (Human) | 1173 aa |
Protein Details: Q9NQ66-2 (PLCB1)
Protein Information
| Accession | Q9NQ66-2 |
|---|---|
| Protein Names | 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 (EC 3.1.4.11) (PLC-154) (Phosphoinositide phospholipase C-beta-1) (Phospholipase C-I) (PLC-I) (Phospholipase C-beta-1) (PLC-beta-1) |
| Gene Symbol | PLCB1 |
| Organism | Homo sapiens (Human) |
| Length | 1173 aa |
| Isoforms | |
| Related PMIDs | 26876311 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAGAQPGVHA11LQLKPVCVSD21SLKKGTKFVK31WDDDSTIVTP41IILRTDPQGF
51-10051FFYWTDQNKE61TELLDLSLVK71DARCGRHAKA81PKDPKLRELL91DVGNIGRLEQ
101-150101RMITVVYGPD111LVNISHLNLV121AFQEEVAKEW131TNEVFSLATN141LLAQNMSRDA
151-200151FLEKAYTKLK161LQVTPEGRIP171LKNIYRLFSA181DRKRVETALE191ACSLPSSRND
201-250201SIPQEDFTPE211VYRVFLNNLC221PRPEIDNIFS231EFGAKSKPYL241TVDQMMDFIN
251-300251LKQRDPRLNE261ILYPPLKQEQ271VQVLIEKYEP281NNSLARKGQI291SVDGFMRYLS
301-350301GEENGVVSPE311KLDLNEDMSQ321PLSHYFINSS331HNTYLTAGQL341AGNSSVEMYR
351-400351QVLLSGCRCV361ELDCWKGRTA371EEEPVITHGF381TMTTEISFKE391VIEAIAECAF
401-450401KTSPFPILLS411FENHVDSPKQ421QAKMAEYCRL431IFGDALLMEP441LEKYPLESGV
451-500451PLPSPMDLMY461KILVKNKKKS471HKSSEGSGKK481KLSEQASNTY491SDSSSMFEPS
501-550501SPGAGEADTE511SDDDDDDDDC521KKSSMDEGTA531GSEAMATEEM541SNLVNYIQPV
551-600551KFESFEISKK561RNKSFEMSSF571VETKGLEQLT581KSPVEFVEYN591KMQLSRIYPK
601-650601GTRVDSSNYM611PQLFWNAGCQ621MVALNFQTMD631LAMQINMGMY641EYNGKSGYRL
651-700651KPEFMRRPDK661HFDPFTEGIV671DGIVANTLSV681KIISGQFLSD691KKVGTYVEVD
701-750701MFGLPVDTRR711KAFKTKTSQG721NAVNPVWEEE731PIVFKKVVLP741TLACLRIAVY
751-800751EEGGKFIGHR761ILPVQAIRPG771YHYICLRNER781NQPLTLPAVF791VYIEVKDYVP
801-850801DTYADVIEAL811SNPIRYVNLM821EQRAKQLAAL831TLEDEEEVKK841EADPGETPSE
851-900851APSEARTTPA861ENGVNHTTTL871TPKPPSQALH881SQPAPGSVKA891PAKTEDLIQS
901-950901VLTEVEAQTI911EELKQQKSFV921KLQKKHYKEM931KDLVKRHHKK941TTDLIKEHTT
951-1000951KYNEIQNDYL961RRRAALEKSA971KKDSKKKSEP981SSPDHGSSTI991EQDLAALDAE
1001-10501001MTQKLIDLKD1011KQQQQLLNLR1021QEQYYSEKYQ1031KREHIKLLIQ1041KLTDVAEECQ
1051-11001051NNQLKKLKEI1061CEKEKKELKK1071KMDKKRQEKI1081TEAKSKDKSQ1091MEEEKTEMIR
1101-11501101SYIQEVVQYI1111KRLEEAQSKR1121QEKLVEKHKE1131IRQQILDEKP1141KGEGSSSFLS
1151-11731151ETCHEDPSVS1161PNFTPPNPQA1171LKW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 17 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.96
|
|
| 74 | - | - | - |
Deep-Palm: 0.97
|
|
| 192 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.97
|
|
| 220 | - | - | - |
Deep-Palm: 0.77
|
|
| 357 | - | - | - |
Deep-Palm: 0.65
|
|
| 359 | - | - | - |
Deep-Palm: 0.78
|
|
| 364 | - | - | - |
Deep-Palm: 0.72
|
|
| 398 | - | - | - |
Deep-Palm: 0.73
|
|
| 428 | - | - | - |
Deep-Palm: 0.81
|
|
| 520 | - | - | - |
Deep-Palm: 0.33
|
|
| 619 | - | - | - |
Deep-Palm: 0.09
|
|
| 744 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.92
|
|
| 775 | - | - | - |
Deep-Palm: 0.85
|
|
| 1049 | - | - | - |
Deep-Palm: 0.92
|
|
| 1061 | - | - | - |
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
cerebral cortex
Specificity: 0.800
4/4 (100.0%)
1
frontal cortex
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 101 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 130 | W → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 168 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 176 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 350 | R → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 350 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 398 | C → S | 0.001764 | SNP | Missense Mutation | LUAD |
| 546 | Y → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 565 | F → C | 0.007299 | SNP | Missense Mutation | READ |
| 603 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 647 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 648 | Y → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 760 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 1029 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |