Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| Q9NRR3 | CDC42SE2 | CDC42 small effector protein 2 … | Homo sapiens (Human) | 84 aa |
Protein Details: Q9NRR3 (CDC42SE2)
Protein Information
| Accession | Q9NRR3 |
|---|---|
| Protein Names | CDC42 small effector protein 2 (Small effector of CDC42 protein 2) |
| Gene Symbol | CDC42SE2 |
| Organism | Homo sapiens (Human) |
| Length | 84 aa |
| Isoforms | No isoforms |
| Related PMIDs | 25914232 29733200 31251020 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSEFWLCFNC11CIAEQPQPKR21RRRIDRSMIG31EPTNFVHTAH41VGSGDLFSGM
51-8451NSVSSIQNQM61QSKGGYGGGM71PANVQMQLVD81TKAG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 7 | CDC42 small effector protein | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.02
|
|
| 10 | DBPTM | CDC42 small effector protein | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.02
|
| 11 | DBPTM | CDC42 small effector protein | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
LNCaP
Specificity: 0.500
2/2 (100.0%)
1
HAP1 cell
Specificity: 0.250
1/1 (100.0%)
1
CEM 174 cell
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.